Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq26 93.3 3e-14 seq27 89.7 4e-13 >seq26 Length=2837646 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/187 (73%), Gaps = 8/187 (4%) Strand=Plus/Plus Query 48505 AAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCG 48564 ||| |||||||||| | || | ||| ||| | || |||| ||||||||||| || Sbjct 2698643 AAGTTCGTCAAGGTCCGCATGCGTACCACCAAGATTCCCCAGATCGGTGACAAGTTCGCC 2698702 Query 48565 TC-CTTCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGAGGACATGCCC 48621 || | |||||| || ||||| || ||| | || | | ||||||||||||||| Sbjct 2698703 TCTCGTCACGGT-CAGAAGGGTACCATTGGTAT--TACTTATCGTCAGGAGGACATGCCC 2698759 Query 48622 TTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAG 48680 ||| || | || || |||||||||||||| || |||||||||||||| |||| || | Sbjct 2698760 TTC-ACTCGTGAAGGTGTGGTGCCCGACCTGATTATCAACCCCCACGCTATTCCTTCTCG 2698818 Query 48681 GATGACC 48687 |||||| Sbjct 2698819 AATGACC 2698825 >seq27 Length=4901019 Score = 89.7 bits (98), Expect = 4e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 27148 TCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCT 27207 || ||||| || |||||||| ||||| || |||| |||||| | || || || | Sbjct 3244444 TCAACGTGGTCGAGGTAGACATGAGCATCGCCCATGGTGTGAATAAGGGTGCCGGGGTGG 3244385 Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || ||| ||||||| | || | ||||| |||| |||| ||||||||| ||||| Sbjct 3244384 AGATCGGCAGCGTGAGCAAGGATATGAGTGAGAAGAGCGTAGGAGGCGATGTTGAAGGGC 3244325 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAG 27314 || || || |||| || | || |||||||||||| ||| ||||| Sbjct 3244324 ACACCAAGACCCACATCACAGGATCTCTGGTAGAGCACACAAGAGAG 3244278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506920791122