Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq27 147 2e-30 seq36 143 2e-29 seq26 109 5e-19 >seq27 Length=4901019 Score = 147 bits (162), Expect = 2e-30 Identities = 144/183 (79%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || |||||||||||||||||||| | Sbjct 3950619 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 3950678 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||||||||| ||||| | ||||| || |||||||||| ||| || ||| ||| | Sbjct 3950679 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 3950737 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 3950738 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3950797 Query 41852 AAA 41854 ||| Sbjct 3950798 AAA 3950800 >seq36 Length=2049559 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||||| || ||||||||||| || || ||||| || Sbjct 284879 CCACCACGCAGACGGAGCACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAA 284820 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||||||| |||| || |||||||| |||||||| || || ||||| ||||| | ||| Sbjct 284819 AGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGG 284760 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| |||| | | | ||||| || ||||| Sbjct 284759 ATACCCTCCTTGTCCTGGATCTTGCTCTT-AACGTTGTCGATCGTGTCAGATGATTCCAC 284701 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||| || || || || || || ||||| || ||||| ||||| Sbjct 284700 TTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAAATTTGCAT 284653 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || ||| ||||||||| ||||| ||||||||| Sbjct 284423 CCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 284364 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||| |||||||| || || ||||| ||||| | || Sbjct 284363 AGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGG 284304 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||| ||| ||| | || | | ||| | | | |||||| ||||| || Sbjct 284303 ATACCCTCCTTATCC-TGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAAC 284245 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || || || ||||||||||| || ||||| Sbjct 284244 TTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 284197 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/208 (72%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || ||| ||||||||||||||| |||||| Sbjct 284195 CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTC 284136 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||| ||||| ||||||||||| ||||| | ||| Sbjct 284135 AGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 284076 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || ||||| ||| ||| | || | ||| || | || | |||||| ||||| Sbjct 284075 ATGCCTTCCTTATCC-TGAATCTTGGACTTGACATTGTCG--ATGGTGTCGGAAGACTCA 284019 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCA 41840 ||||| | || || || || || |||| Sbjct 284018 ACCTCAAGAGTGATGGTCTTGCCGGTCA 283991 >seq26 Length=2837646 Score = 109 bits (120), Expect = 5e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | || || || || || ||||||||| ||||| ||||| Sbjct 1000972 ACCACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 1001031 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| |||| |||||||||||||||||||| ||||||||||| ||||| | Sbjct 1001032 CGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 1001091 Query 41752 GGGAACGCTCTCCTTGTC 41769 ||| | | ||||||||| Sbjct 1001092 GGGGATACCCTCCTTGTC 1001109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303641714400