Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 196 5e-45 seq1 127 2e-24 >seq2 Length=10455807 Score = 196 bits (216), Expect = 5e-45 Identities = 214/284 (75%), Gaps = 3/284 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||||| |||||| | || || Sbjct 6508737 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCATTCTGGACCGCTGAGGAGATTGATCTC 6508678 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| ||||||| | ||| |||||||| | ||||| | |||||| Sbjct 6508677 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATCTCC 6508618 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| ||||| ||| |||||| || ||||||||||| || || |||||| Sbjct 6508617 CACGTCCTGGCCTTCTTCGCGGCCTCCGACGGTATTGTCAACGAGAACCTCGTTGAGCGT 6508558 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| ||||| ||||||| || |||||||||||||| ||||| ||| Sbjct 6508557 TTCAGTGCAGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATAATGATG 6508498 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 |||||| | ||||| || | || || ||||||||||| || Sbjct 6508497 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTA 6508454 Score = 179 bits (198), Expect = 4e-40 Identities = 313/450 (70%), Gaps = 4/450 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||| | ||||| | ||||||||| || | | ||| | |||||| ||| | Sbjct 6508333 AGAAGGCCAACTGGGCCATCCGCTGGATCAACGACCGTGAGTCAACCTTCGCTTCGCGTC 6508274 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| |||||||| || |||||||| ||||||| || ||| ||||| |||| || | Sbjct 6508273 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCATCTTCT 6508214 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| || ||||| ||||| || || |||||| ||||||||| ||||| | | Sbjct 6508213 GGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTG 6508154 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCG 117220 |||||||||| || ||||| || ||| |||||||| || || || || ||| Sbjct 6508153 ACGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCTCACATGAACCACCGCCCCG 6508094 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 | | | | || ||| ||| | ||| || || | |||||||||| ||| | Sbjct 6508093 ATC-CCAAGGTTGTTGAGGAAATCATTGTCGAGGCCGTTGGCATCGAGCAGGAGTTCTTG 6508035 Query 117281 ACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACAT 117339 || || || || || |||| |||||| || | || | | | ||||| || ||||| Sbjct 6508034 ACTGACGCTCTTCC-CTGCGCTCTGCTTGGCATGAACTCCAAGCTGATGTGCCAGTACAT 6507976 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 ||||||||||| ||| | |||||| | | || | | | ||| |||||||| | | Sbjct 6507975 TGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACTCTGC 6507916 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTC 117429 ||| || | ||||| ||| | |||||| Sbjct 6507915 CAATCCCTTCGACTTCATGGAGTCCATCTC 6507886 >seq1 Length=13597520 Score = 127 bits (140), Expect = 2e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | | Sbjct 11441993 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 11442052 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||||||| | ||||| || || || Sbjct 11442053 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCCT 11442111 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | |||||||| | |||||||||||||||||| Sbjct 11442112 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 11442171 Query 40878 GG 40879 || Sbjct 11442172 GG 11442173 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || || ||||| | || ||||| | | Sbjct 4023964 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 4024023 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||| || ||| | ||||| Sbjct 4024024 GACACTATCGACAACGTT-AAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCA 4024082 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || |||||||| |||| || || || |||||||| Sbjct 4024083 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAA 4024142 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| ||| ||||| || |||||||| || | |||||| Sbjct 4024143 CATCCAGAAGGAGAGCACCCTGCACCTGGTGTTGCGTCTGCGTGGCGGC 4024191 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| |||||||| || || | || ||||| | || Sbjct 4023736 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 4023795 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | || || |||||||| || | || || Sbjct 4023796 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 4023855 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| ||||| ||||| || || | || || ||| |||||||||| Sbjct 4023856 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 4023915 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| |||| || || || || Sbjct 4023916 ATCCAGAAGGAATCCACCCTCCACCTTGT 4023944 Score = 105 bits (116), Expect = 7e-18 Identities = 134/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || || || ||| ||| | | | | |||| ||||| Sbjct 4023247 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAACG-TCAAG 4023305 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| ||||| ||||| | ||||| || || | |||| ||| ||| Sbjct 4023306 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGC 4023365 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || |||||||| |||| || || || |||||||||||||||||||||| | || || Sbjct 4023366 AAGCAGCTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTC 4023425 Query 40891 CA 40892 || Sbjct 4023426 CA 4023427 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || || || || ||||| |||| || || | | |||| | | Sbjct 4023518 TCGTCAAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCG 4023577 Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | |||| | ||| || |||| ||||| |||||||| ||| | |||||||| || || Sbjct 4023578 ACAACGTT-AAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTT 4023636 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| ||||| ||| |||| |||| || || || |||||||||||||||||| Sbjct 4023637 ATTTTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAA 4023696 Query 40879 GAGGCCACGCTGCA 40892 ||| |||| || || Sbjct 4023697 GAGTCCACTCTACA 4023710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219167798800