Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 125 8e-24 >seq1 Length=13597520 Score = 125 bits (138), Expect = 8e-24 Identities = 162/220 (74%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||||| |||| ||||||||||| || || ||||| || | ||||| || | Sbjct 4024179 ACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCC 4024120 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||||||||||||||| || || ||||||||||| | || | | |||||| Sbjct 4024119 GTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTT 4024060 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| || | || | | | ||| | | | ||||| |||| || || || | || Sbjct 4024059 GTCC-TGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTC---TCGACCTCTAGCG 4024004 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || || || ||||| |||||||| ||||| Sbjct 4024003 TGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 4023964 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 11442173 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 11442114 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||| ||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 11442113 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 11442055 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 11442054 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 11441995 Query 43173 AA 43174 || Sbjct 11441994 AA 11441993 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | ||||| || | ||| ||| || || || ||||| || | | Sbjct 4023734 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4023675 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || |||| || | |||||| || ||||| || || ||||||||||||| || Sbjct 4023674 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 4023615 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| | || | | | ||| | | | ||||| || || || Sbjct 4023614 ATGCCCTCCTTGTCC-TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAAC 4023556 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 |||| ||||| || || || || || ||||| || Sbjct 4023555 CTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGAC 4023520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817564261400