Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06-
23] 5 sequences; 32,525,541 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 8e-24
>seq1
Length=13597520
Score = 125 bits (138), Expect = 8e-24
Identities = 162/220 (74%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||||||||| |||| ||||||||||| || || ||||| || | ||||| || |
Sbjct 4024179 ACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCC 4024120
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || ||||||||||||||||| || || ||||||||||| | || | | ||||||
Sbjct 4024119 GTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTT 4024060
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143
|||| || | || | | | ||| | | | ||||| |||| || || || | ||
Sbjct 4024059 GTCC-TGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTC---TCGACCTCTAGCG 4024004
Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| || || || || || ||||| |||||||| |||||
Sbjct 4024003 TGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 4023964
Score = 96.9 bits (106), Expect = 4e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || ||| || || | || || |||||||| || ||||| |
Sbjct 11442173 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 11442114
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||| ||||| | || | || |||||||||| ||| || |||| ||| |
Sbjct 11442113 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 11442055
Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||||||||| || ||||||| || ||||| || ||||| || ||||| ||
Sbjct 11442054 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 11441995
Query 43173 AA 43174
||
Sbjct 11441994 AA 11441993
Score = 89.7 bits (98), Expect = 6e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || | || ||| | ||||| || | ||| ||| || || || ||||| || | |
Sbjct 4023734 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4023675
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || |||| || | |||||| || ||||| || || ||||||||||||| ||
Sbjct 4023674 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 4023615
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135
| || |||||||||| ||| | || | | | ||| | | | ||||| || || ||
Sbjct 4023614 ATGCCCTCCTTGTCC-TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAAC 4023556
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
|||| ||||| || || || || || ||||| ||
Sbjct 4023555 CTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGAC 4023520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817564261400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |