Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 320 1e-82 seq2 129 5e-25 >seq1 Length=13597520 Score = 320 bits (354), Expect = 1e-82 Identities = 1210/1882 (64%), Gaps = 28/1882 (1%) Strand=Plus/Minus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 || || || ||||| |||| | | ||| | |||| || || || |||||||| ||| Sbjct 2743572 TCGACGGTGAACTGAATGGGGGCGGAGGCGGCCATGGTACGCAGGTAGTACATGCCGGTC 2743513 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 ||||||||||||||||| | || || || || | || || | | ||| Sbjct 2743512 TTCAGACCCATCTTCCAGCCAGCGAAGTGCATGCTGGTGAGCTTGCCCATAGTAGGCTCC 2743453 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | | || | || | ||||| ||||||||| | || || || ||||||||||| Sbjct 2743452 TTAAGGTGGATGTTAAGGGACTGCGACTGATCGATGTAGGCACCGCGGTCGGCGGCCATC 2743393 Query 22289 TTTATCAATGTA-CGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAA 22347 | | ||||| ||| || || ||||| |||||||||||||| | |||| || Sbjct 2743392 TGCAG-AATGTTGCGCTGGGAGATCTCCCAGACGGTCTTGTACAGGGCCTTGATATCGGC 2743334 Query 22348 CGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGT 22407 || || ||| |||||||||| || | | ||||| || || || | Sbjct 2743333 GGGGATGTTAGGGATGTTCTGGACGGAACCACCGTCGGCAATGATGCGGTTCTTCATGTT 2743274 Query 22408 ATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAA 22467 ||| ||||| |||| || || ||| || | || | ||||||| || || || Sbjct 2743273 GTCGGACCACAGGCCGAGATCGACCAGATCCTTCAGGAGCCAAGGGTTCACGACCTGGAA 2743214 Query 22468 CTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATT 22527 ||| || | || ||| ||||| ||| ||||| || ||| | || ||||| | || || Sbjct 2743213 CTCACCAGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGCTCGAAGCACTCGTT 2743154 Query 22528 GTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCT 22587 | || || || ||| ||| || || ||||| || || | || || ||| | Sbjct 2743153 GAAACCAAGAATTTGACTGGTACTGGCAGTAGGCATAGGAGCGACCAACAGACTGTTGCG 2743094 Query 22588 CAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGT 22647 | || || | ||| || ||| || | ||||||||| ||||||| || || Sbjct 2743093 GACACCAGTCTCGGCAATCTTGGCCTTCAGGGAGGCCCAGTCCCAGAGATCGGTGGGAGT 2743034 Query 22648 CACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGCCTTCGTAC 22705 ||||||||| ||||| |||| | ||| |||| || || ||| ||| Sbjct 2743033 GCG---GTCCCACATGTCGTACTGCAGGATGCCCTGCGAGACG--GGAGAGCCAGGGTAG 2742979 Query 22706 GTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATAT 22765 || || || ||||| || ||||| ||| || || ||| || |||| || Sbjct 2742978 GTCTCATAGGGACCCAGCTTCTTGGCAATATCGGAGGAAGCAGTCAAGGCACCGTGGTAG 2742919 Query 22766 ATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGC 22825 || ||||||||||| | |||| | | || || | ||| | |||| |||| Sbjct 2742918 ATGGTCTCGAAGATCTGGATGTTGAGCTGTCTCGCCTCGGGGGAATCGAATGGCAGACGC 2742859 Query 22826 ATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGA 22885 | || ||| || || || | ||| | || || | | |||| || |||| | Sbjct 2742858 AGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCAAGAGCGATGGGGCGGTGACGGAAG 2742799 Query 22886 TTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTT 22945 || | || ||||| || | || || | || ||| || | |||||||||| Sbjct 2742798 TTGCTCTTCTTCGCCTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCAAGTTG 2742739 Query 22946 CTGGTC-ACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC-CG---ATT 23000 || | | || | | | ||||||| || |||| || | Sbjct 2742738 -TGAACGAGAACCTGCACGACCTCGTGGAGCTTGCCAAAGTCATACTCGCCTCGGGCAGA 2742680 Query 23001 GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGG 23060 || | ||||| || || ||||| || || || ||||| || |||||||| || || Sbjct 2742679 GT-CGACAAAGGTGGGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGG 2742621 Query 23061 ACGTGTACTCTACAATTTCGGTACATAGATT---GCTACACTTTATCGTGCCCAAATTGC 23117 ||||||| | || || || || || || ||| | || || |||| || Sbjct 2742620 CACTGTACTCAATGATCTCAGTGCACAGGTTAGAGCTGCGA---ATAGTACCCAGGTTCT 2742564 Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177 ||||||| || || | ||||| | |||||||||||||||| | || | || |||||| Sbjct 2742563 TCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGG 2742504 Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTG 23236 ||| | ||||| || || ||| | ||||||| | | ||| || | | | Sbjct 2742503 TCTGGGCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGATG-GTCTTGCGGCCACGG 2742445 Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAG 23295 || |||| ||||||||| ||| | || || || || | ||||| ||| || ||||| Sbjct 2742444 CCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACA-TCAGCCAG 2742386 Query 23296 GCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCAT 23355 |||||| | | | || || | ||| |||| || |||||||| |||| Sbjct 2742385 GCCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCAT 2742326 Query 23356 AAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCC 23415 ||| || || || |||| ||||||||||| || || ||||| || |||||||| || || Sbjct 2742325 AAAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACC 2742266 Query 23416 GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAAC 23475 | |||||| || ||| | || || || || || || ||||||||||| ||||| | Sbjct 2742265 GTGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGAT 2742206 Query 23476 GGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTA 23535 ||||| || || || | ||| || || ||||| ||||| || || || |||||||| | Sbjct 2742205 AGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAA 2742146 Query 23536 CACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAAC 23594 ||| | ||||| || || | ||||||||| | |||| | || ||| | |||| Sbjct 2742145 CACACGCAGCATAGGAACAATACCGTTGGAGGAGCCG-TTGGTTCCACCAATGTAAGAAC 2742087 Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | | || |||| | ||| || | | ||| || || ||| | | || || ||||| | Sbjct 2742086 CGGTAGCGCGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGG 2742027 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 | || || ||||| || ||||| |||||||||||||| | | | | |||| || Sbjct 2742026 CACAAGTCTTGAGAGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGA 2741967 Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774 | || || | | || | || ||| |||||||| |||||| || ||| ||||| | Sbjct 2741966 AGCAAGATGCAAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGG 2741907 Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834 | ||||| | ||||| | | ||| || || ||||| ||||||||||| |||| Sbjct 2741906 TGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGT 2741847 Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAA 23894 | || |||| || || ||||||| || || || || | ||| | | |||||||| Sbjct 2741846 GGATGCCGACAGCAACACGCATCAGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAA 2741787 Query 23895 TTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCAC 23954 | | || |||||||| | | || || ||||| || ||| ||||| ||||||| Sbjct 2741786 TCCGAAGGAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCAC 2741727 Query 23955 GATCGTGCACTATGGCCGAATT 23976 | |||| ||| || ||||| || Sbjct 2741726 GGTCGTACACAATTGCCGAGTT 2741705 Score = 116 bits (128), Expect = 3e-21 Identities = 149/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| ||||| || || || ||||| |||| ||||| | || |||| ||| Sbjct 4023518 TCGTCAAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCG 4023577 Query 31263 A-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 | |||| | | | ||| | ||||||||| ||| | || ||||||||||||||||| Sbjct 4023578 ACAACGTTAAGTCCAAGATTCA-GGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTT 4023636 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||| ||||| |||||||| ||| | ||| || ||| || ||||| || ||| Sbjct 4023637 ATTTTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAA 4023696 Query 31382 GAATCGACTCTTCATCTGGTACT 31404 || || ||||| || |||| || Sbjct 4023697 GAGTCCACTCTACACTTGGTTCT 4023719 Score = 82.4 bits (90), Expect = 7e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||||||||| || || || ||||| | || || || || Sbjct 4023964 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 4024023 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| |||| | | | ||| | ||||||||| || | || || ||||| Sbjct 4024024 GACACTATCGACAACGTTAAGAGCAAGA-TCCAGGACAAGGAGGGTATTCCCCCTGACCA 4024082 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||| || |||||||| || ||| |||| ||| Sbjct 4024083 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGAC 4024119 >seq2 Length=10455807 Score = 129 bits (142), Expect = 5e-25 Identities = 285/421 (68%), Gaps = 16/421 (4%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || |||||||| ||||| ||||| ||||| || ||| || || | || || ||| || Sbjct 6508268 GCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCATCTTCTGGCTG 6508209 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||||||||| || || || || ||||||| |||| || || |||||| Sbjct 6508208 AAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGACGAG 6508149 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160 |||||||| ||||| || || || || ||| ||||||||| | |||| | | Sbjct 6508148 GGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCTCACAT----GAACCACCGCCCC-- 6508095 Query 58161 GATCGCA----TCTT--GGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 |||| || | || ||| || || |||||| || | ||||| | ||||| | Sbjct 6508094 GATCCCAAGGTTGTTGAGGAAATCATTGTCGAGGCCGTTGGCATCGAGCAGGAGTTCTTG 6508035 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || || || || |||| || |||||| | |||||| |||||||| Sbjct 6508034 ACTGACGCTCTTCCCTGCGCTCTGCTTGGCATGAACTCCAAGCTGATGTGCCAGTACATT 6507975 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 ||||| || || ||| | || || | | || | ||| || | |||||| | Sbjct 6507974 GAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGA-AGT-ACTACAACTCTG 6507917 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAA 58392 ||||| || || || ||| | ||||| || | |||||||| ||||| ||||| | Sbjct 6507916 CCAATCCCTTCGACTTCATGGAGTCCATCTCTCTGGCCGGCAAGACCAACTTCTTCGAGA 6507857 Query 58393 A 58393 | Sbjct 6507856 A 6507856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766372139600