Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 165 1e-35 seq2 134 2e-26 >seq1 Length=13597520 Score = 165 bits (182), Expect = 1e-35 Identities = 732/1144 (64%), Gaps = 20/1144 (2%) Strand=Plus/Minus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 || ||||| || ||||| || ||||||| || | || | || ||||||||||| Sbjct 2742654 GAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAC 2742595 Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017 || ||| | ||||| || | || | || |||||||| |||| || |||||| Sbjct 2742594 AGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCC 2742535 Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077 || || || ||||| || ||||||| || |||| | || | ||| || | ||||| | Sbjct 2742534 TTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGA-G 2742476 Query 63078 ACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGTGTATACA 63132 || ||||||| || | || | | ||||| ||||| | | ||| | Sbjct 2742475 TTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCTTGCTCGTACTTGGCGTA---A 2742421 Query 63133 ATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 63191 | | |||||||| || || | |||| ||| || ||| || | || || | Sbjct 2742420 AGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAG 2742361 Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63250 | | ||| || |||| ||| || || ||||||||||| || || |||| ||||| Sbjct 2742360 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCG 2742301 Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 || ||| || || | || | | ||||| || || ||||| ||||||||||| Sbjct 2742300 TAGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAA 2742242 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | | ||| | |||||||| |||| ||| || || | | ||||| || ||||| Sbjct 2742241 TTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTT 2742182 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 || ||||| || | || | |||||||| ||| | || | || ||| |||| |||||| Sbjct 2742181 ACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 2742122 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATT 63488 ||| || || ||||| || || || || | || ||||| | ||| Sbjct 2742121 GTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 2742062 Query 63489 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAG 63548 ||||| || || || || | || ||||| | || || || | || |||||| Sbjct 2742061 --CAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAG 2742004 Query 63549 ATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63608 |||||||| ||||| ||| || |||||| || || || || | | ||| | | Sbjct 2742003 ATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGG 2741944 Query 63609 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63668 ||| | ||||| || | || || |||||||| || || | || | || | | Sbjct 2741943 GGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATCAAG 2741884 Query 63669 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63728 | ||| |||||||| || || || ||| || || || || || |||||||| Sbjct 2741883 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACACGCATC 2741824 Query 63729 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63788 | || |||||| || | ||| | | || ||| || | | ||| || || Sbjct 2741823 AGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAACGCTCG 2741764 Query 63789 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63848 | || || || || || ||||||| ||||| || ||||| | ||| |||||||| Sbjct 2741763 AGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATTGCCGAGTTG 2741704 Query 63849 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGAATG 63907 || | || || || |||| || | ||| ||| | | |||| || || |||| | | Sbjct 2741703 AGCTCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGGAGCAGG 2741645 Query 63908 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63967 || || || || || ||||| | | | | ||| || || | ||| | || Sbjct 2741644 CTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGAGATGACCATAGAGAATTGCTT 2741585 Query 63968 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGG 64027 |||||||| |||||| || || || ||||| || | || || |||||||| || || || Sbjct 2741584 TTTTGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCAGG 2741525 Query 64028 ATGT 64031 ||| Sbjct 2741524 GTGT 2741521 >seq2 Length=10455807 Score = 134 bits (148), Expect = 2e-26 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || ||| ||||| || ||| ||||||||||| | | || || |||||||| Sbjct 6508117 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 6508176 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || ||||| ||||||||||| || ||||| || |||||||||||||| ||| Sbjct 6508177 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCA 6508236 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 || |||||||| || || || || || ||||||| Sbjct 6508237 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 6508270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947161065800