Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 131 2e-25 seq1 116 3e-21 >seq2 Length=10455807 Score = 131 bits (144), Expect = 2e-25 Identities = 336/507 (66%), Gaps = 21/507 (4%) Strand=Plus/Minus Query 46098 CAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCG 46157 |||||| || ||||||| || ||||||||| | | | || ||||| ||| Sbjct 6508335 CAAGAAGGCCAACTGGGCCATCCGCTGGATCAACGACCGTGAGTCAACCTTCGCTTCGCG 6508276 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | |||| ||||| || ||| ||||| |||| || |||||| || || ||||||| Sbjct 6508275 TCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCATCTT 6508216 Query 46218 TTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCG 46277 | | || | ||| | ||||| || || || || |||||||||||| || || Sbjct 6508215 CTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCG 6508156 Query 46278 CGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAA 46337 |||||||| || || || ||||| || || ||| || | | ||| | || || || Sbjct 6508155 TGACGAGGGTCTCCACACTGACTTCGCTTG--TCTGCTGT-TCTCTCACATGAACCAC-C 6508100 Query 46338 GCTTGCGCCCGACACC----GTGCTGAG-----CATGTTCAAGGAGGCGGTGGCCATTGA 46388 || ||||| || || |||| ||| || ||||| || | ||| || Sbjct 6508099 GC-----CCCGATCCCAAGGTTGTTGAGGAAATCATTGTC---GAGGCCGTTGGCATCGA 6508048 Query 46389 GAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAAT 46448 | ||||||| || || | ||| || ||| || ||||| ||||||||| | || || Sbjct 6508047 GCAGGAGTTCTTGACTGACGCTCTTCCCTGCGCTCTGCTTGGCATGAACTCCAAGCTGAT 6507988 Query 46449 GTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCA 46508 |||| | ||||| ||||| || || ||||| ||||| ||| || | | |||| | Sbjct 6507987 GTGCCAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTA 6507928 Query 46509 TTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAA 46568 | || | |||||| || || || ||| | |||||| |||| ||||| || || Sbjct 6507927 CTACAACTCTGCCAATCCCTTCGACTTCATGGAGTCCATCTCTCTGGCCGGCAAGACCAA 6507868 Query 46569 TTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || ||||| ||||| ||||| || || Sbjct 6507867 CTTCTTCGAGAAGCGTGTCGGTGACTA 6507841 >seq1 Length=13597520 Score = 116 bits (128), Expect = 3e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| |||||| ||||| ||||||||||| ||| ||| Sbjct 11442173 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 11442114 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||| ||||| || ||||| || || ||||| ||| || ||||| | | Sbjct 11442113 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 11442054 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||||| |||| ||||| ||| ||||| || || || || |||| Sbjct 11442053 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 11441994 Query 131225 AA 131226 || Sbjct 11441993 AA 11441992 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | || || || || || | || |||||||| || |||||||| ||| Sbjct 4023452 GCCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 4023393 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || |||||| ||||||||||| ||| |||| |||||||| ||||| ||||| Sbjct 4023392 CAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGG 4023333 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||||| | || | |||||| ||||||| | Sbjct 4023332 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAAC 4023273 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || || || Sbjct 4023272 CTCAAGGGTGATGGTCTTGCCAGT 4023249 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||| || ||||| || |||||||| ||| Sbjct 4023962 CCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 4023903 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || ||||||||||||||| |||| | |||||| || || ||||| Sbjct 4023902 AGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGA 4023843 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||| | | || | ||| |||| ||||||| Sbjct 4023842 ATGCCCTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACC 4023783 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||| || || || || || |||||||||||||| Sbjct 4023782 TCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 4023736 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| ||||| ||| | || | ||| |||||| || |||||||| || Sbjct 4024191 GCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 4024132 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| |||||||| || ||| |||| | |||||||||||| || || Sbjct 4024131 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGG 4024072 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||| | | || | ||| || | | ||||| Sbjct 4024071 AATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGAC 4024012 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| ||||| || || || |||||||| Sbjct 4024011 CTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 4023964 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || |||| || ||||| || || |||||||| ||| | Sbjct 4023734 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4023675 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| | ||||||||| ||| | || | |||||||||||| || || Sbjct 4023674 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 4023615 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 4023614 ATGCCCTCCTTGTC 4023601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012770499200