Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4 132 3e-26 seq1 95.1 8e-15 >seq4 Length=3044168 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 2138 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 2197 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 2198 ATCCATTCATGCGCGTCACTAATTAGATGACGA 2230 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 10987 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 11046 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 11047 ATCCATTCATGCGCGTCACTAATTAGATGACGA 11079 >seq1 Length=13597520 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | || ||||||||||| || || ||||||||||| || || ||||| || || Sbjct 4024190 CCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 4024131 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | |||| |||| || | || || || || || || || || || || || | ||| Sbjct 4024130 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 4024071 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| || || ||| || || | || ||| ||| || || || Sbjct 4024070 ATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACC 4024011 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || ||||| || || |||| || || || || |||||||| Sbjct 4024010 TCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 4023964 Score = 93.3 bits (102), Expect = 3e-14 Identities = 198/293 (68%), Gaps = 12/293 (4%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | | || | || ||||||||||| ||||| ||||||| Sbjct 7949845 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGTAACGGTA 7949788 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314 |||| ||||| | ||||| |||||| || || || | ||| | || ||| | Sbjct 7949787 TTAAGACCGTTGTCGTCAA----CCTGAACTCGGTTGCCCAGTCTCTCAGTCGGCCTCCT 7949732 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 | || | | || || ||||| | |||||||| || ||| | | | | | | Sbjct 7949731 GCTTATCTCATCAAGTACTTCGGATTTGAACTTGGTGCCCAGGCCAACGCTAAGCCCTCT 7949672 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 | || || | ||| | ||||| || || || | ||||||| || || | || ||| Sbjct 7949671 GATGACCGTTGGATCATCAACGGTTCTCACGACGCCCCCAAGCTCCAAGATTACCTCGAC 7949612 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || || ||| |||||||||||| || | | ||| | ||||| |||||||| Sbjct 7949611 GGTTTCATTTCCAAGTTTGTGCTATGCAAGAAGTGCAAGAACCCCGAGACCGA 7949559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947179589155