Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06-
23] 5 sequences; 32,525,541 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2 141 2e-28
seq3 107 4e-18
seq1 84.2 4e-11
>seq2
Length=10455807
Score = 141 bits (156), Expect = 2e-28
Identities = 278/405 (69%), Gaps = 12/405 (3%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||||||||| |||||||||||||||||| || |
Sbjct 6507859 TCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATGGACTCCATGAAGTCGAAGGGATTGGCA 6507918
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| ||||| | ||| | ||| || || || | | |||||| || || ||||| |
Sbjct 6507919 GAGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATG 6507978
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | |||||| | ||||||||||||| || | || |||| || ||| | |
Sbjct 6507979 TACTGGCACATCAGCTTGGAGTTCATGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAG 6508038
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA----CCTGTGCCAGAGA 251798
|| |||| ||| || |||| ||||| | | ||| ||| | | || | | |
Sbjct 6508039 AACTCCTGCTCGATGCCAACGGCCTCGACAATGATTTCCTCAACAACCTTGGGATCGGGG 6508098
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856
| | | ||| || | ||| |||| || | || || | || ||| |||||||||
Sbjct 6508099 C-GGTGGTT---CATGTGAGAGAACAGCAGACAAGCGAAGTCAGT--GTGGAGACCCTCG 6508152
Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916
|| ||| ||| | ||||||||| | | || |||||||||| ||||| ||| | |||
Sbjct 6508153 TCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGC 6508212
Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
|||||||| | || || |||||||| | | ||||||||||
Sbjct 6508213 CAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 6508257
>seq3
Length=5401029
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 279369 TTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGT 279428
||||| || || || |||| ||||||||||| ||| || | ||| | ||||||||
Sbjct 1569665 TTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAACCAGACTCACCTGCGCCTCAAGCGT 1569606
Query 279429 GGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCC 279488
|| | || || |||||| |||||||||| || | || |||| ||| || ||||| |||
Sbjct 1569605 GGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTTCCGGAAAGACCACCCTCATGCGTGCC 1569546
Query 279489 ATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCATCTGAGGTAAGGACAGTGTATGTA 279548
||| |||| ||||| || || || || || |||||| | ||| || || ||
Sbjct 1569545 ATTAACAACGAGCAGCTTGAGGGCTTCCCCAAGAAGGATGAGGTCAAGACCGTCTACGTC 1569486
Query 279549 GAGCACGACATCGACTC 279565
|||||||| |||||||
Sbjct 1569485 GAGCACGATCTCGACTC 1569469
Score = 91.5 bits (100), Expect = 3e-13
Identities = 356/558 (64%), Gaps = 14/558 (3%)
Strand=Plus/Minus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATG----ATGTGGAGCGTTCTAT 218573
||||||||| ||||||||||||| || ||| ||||| || ||||||| ||
Sbjct 5239306 GACTTCATCAACAAGGAGCTCATCCTGTTCA----GTATGGCGGATAACCAGCGTTCGAT 5239251
Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633
|| ||| |||||||| | |||||| ||||| ||| | || || |||
Sbjct 5239250 CCCTTCCGTTGTGGATGGTTTGAAGCCAGGACAGCGCAAGGTGCTTCACACCTGTTTCCG 5239191
Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693
|| ||||| | || || ||||| | | || | | ||| ||||||||| ||| |
Sbjct 5239190 CCGCAACCTAAAGAAGGACATGAAGGTGGTTGAGCTGGCAGGTCATGTATCCGGAATGAC 5239131
Query 218694 TGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTA 218753
| ||||||||||||||| |||||| | || || || | || ||| ||
Sbjct 5239130 AGCCTACCATCACGGTGATGTCTCCCTGCAGCAGACTATCGTTGGTCTTGCTCAGACCTT 5239071
Query 218754 TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATT 218813
||| ||| |||||||| |||| ||| |||| || | || ||| ||| ||
Sbjct 5239070 TGTTGGCTCCAACAACATCAACTGCCTGGAGCCCAGTGGAAATTTCGGTAGTCGACTCCA 5239011
Query 218814 GGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCG 218873
||||| ||| |||| ||| | || || | || |||| ||| | | ||
Sbjct 5239010 AGGTGGTGGCGATTGTGCCAGTGCTCGTTACATTTACACTCGCCTGTCTCCCTTTGCACG 5238951
Query 218874 CCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTC 218933
| |||| ||| | ||||||||| || || | ||| || ||||||||
Sbjct 5238950 CAAGGTTTTCCACTCGGCCGATGAACCCCTACTGACGTACAACGAAGACGATGGCAAGAA 5238891
Query 218934 GATTGAGCCCGAGTGGTATGTGCCTGCTATTCC---GTTTTTGCTCGTAAATGGTGCCAA 218990
||||||||||||| | | |||||| | || | ||||| || || ||||| |
Sbjct 5238890 GATTGAGCCCGAGGTCTTTATGCCTGTCGTCCCGATGATTTTGATC---AACGGTGCGGA 5238834
Query 218991 TGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGA 219050
||||||||| || || | ||| || || || |||||||| |||| || | |
Sbjct 5238833 TGGTATCGGAACTGGTTGGAGTTCTTCTATCCCCAACTACAATCCTGAGGATGTCGTGAA 5238774
Query 219051 CAACGTCAAGCGTCTCAT 219068
||| ||||||| || ||
Sbjct 5238773 CAATCTCAAGCGCCTGAT 5238756
>seq1
Length=13597520
Score = 84.2 bits (92), Expect = 4e-11
Identities = 266/410 (65%), Gaps = 3/410 (1%)
Strand=Plus/Minus
Query 294094 CCCTCAGACTCATACTTGGTGTAAAGCTCTTCGTATTCCTTGCCATATACATCAGACAGG 294153
||||| ||| ||||||| |||||| | ||| | |||| ||| || ||||||| ||||
Sbjct 2742444 CCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGG 2742385
Query 294154 CCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTCATG 294213
|| || ||||| ||| | || | ||| | | | | ||| |||||||||||
Sbjct 2742384 CCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATA 2742325
Query 294214 AATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCT 294273
|| || || | ||||| ||||| || | || ||||| || | ||||| |||
Sbjct 2742324 AAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCG 2742265
Query 294274 TGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACA 294333
|| || || || ||||| || | || |||| || || ||||| || | |
Sbjct 2742264 TGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATA 2742205
Query 294334 GCAAAGG-ACC--CCTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAAC 294390
||||||| ||| | || || ||||||| | | ||| | ||| ||| ||||
Sbjct 2742204 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAAC 2742145
Query 294391 ACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCTCAGCCCCG 294450
|| ||||||||| || || || | ||| || |||||||| | ||| | || |||
Sbjct 2742144 ACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCG 2742085
Query 294451 CGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGA 294500
|||||||| | | | ||||| || |||||| | ||||||
Sbjct 2742084 GTAGCGCGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGA 2742035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836734154205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |