Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 141 2e-28 seq3 107 4e-18 seq1 84.2 4e-11 >seq2 Length=10455807 Score = 141 bits (156), Expect = 2e-28 Identities = 278/405 (69%), Gaps = 12/405 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||||||||| |||||||||||||||||| || | Sbjct 6507859 TCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATGGACTCCATGAAGTCGAAGGGATTGGCA 6507918 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| | ||| | ||| || || || | | |||||| || || ||||| | Sbjct 6507919 GAGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATG 6507978 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | ||||||||||||| || | || |||| || ||| | | Sbjct 6507979 TACTGGCACATCAGCTTGGAGTTCATGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAG 6508038 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA----CCTGTGCCAGAGA 251798 || |||| ||| || |||| ||||| | | ||| ||| | | || | | | Sbjct 6508039 AACTCCTGCTCGATGCCAACGGCCTCGACAATGATTTCCTCAACAACCTTGGGATCGGGG 6508098 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856 | | | ||| || | ||| |||| || | || || | || ||| ||||||||| Sbjct 6508099 C-GGTGGTT---CATGTGAGAGAACAGCAGACAAGCGAAGTCAGT--GTGGAGACCCTCG 6508152 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||| | ||||||||| | | || |||||||||| ||||| ||| | ||| Sbjct 6508153 TCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGC 6508212 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||| | || || |||||||| | | |||||||||| Sbjct 6508213 CAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 6508257 >seq3 Length=5401029 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 279369 TTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGT 279428 ||||| || || || |||| ||||||||||| ||| || | ||| | |||||||| Sbjct 1569665 TTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAACCAGACTCACCTGCGCCTCAAGCGT 1569606 Query 279429 GGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCC 279488 || | || || |||||| |||||||||| || | || |||| ||| || ||||| ||| Sbjct 1569605 GGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTTCCGGAAAGACCACCCTCATGCGTGCC 1569546 Query 279489 ATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCATCTGAGGTAAGGACAGTGTATGTA 279548 ||| |||| ||||| || || || || || |||||| | ||| || || || Sbjct 1569545 ATTAACAACGAGCAGCTTGAGGGCTTCCCCAAGAAGGATGAGGTCAAGACCGTCTACGTC 1569486 Query 279549 GAGCACGACATCGACTC 279565 |||||||| ||||||| Sbjct 1569485 GAGCACGATCTCGACTC 1569469 Score = 91.5 bits (100), Expect = 3e-13 Identities = 356/558 (64%), Gaps = 14/558 (3%) Strand=Plus/Minus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATG----ATGTGGAGCGTTCTAT 218573 ||||||||| ||||||||||||| || ||| ||||| || ||||||| || Sbjct 5239306 GACTTCATCAACAAGGAGCTCATCCTGTTCA----GTATGGCGGATAACCAGCGTTCGAT 5239251 Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633 || ||| |||||||| | |||||| ||||| ||| | || || ||| Sbjct 5239250 CCCTTCCGTTGTGGATGGTTTGAAGCCAGGACAGCGCAAGGTGCTTCACACCTGTTTCCG 5239191 Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693 || ||||| | || || ||||| | | || | | ||| ||||||||| ||| | Sbjct 5239190 CCGCAACCTAAAGAAGGACATGAAGGTGGTTGAGCTGGCAGGTCATGTATCCGGAATGAC 5239131 Query 218694 TGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTA 218753 | ||||||||||||||| |||||| | || || || | || ||| || Sbjct 5239130 AGCCTACCATCACGGTGATGTCTCCCTGCAGCAGACTATCGTTGGTCTTGCTCAGACCTT 5239071 Query 218754 TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATT 218813 ||| ||| |||||||| |||| ||| |||| || | || ||| ||| || Sbjct 5239070 TGTTGGCTCCAACAACATCAACTGCCTGGAGCCCAGTGGAAATTTCGGTAGTCGACTCCA 5239011 Query 218814 GGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCG 218873 ||||| ||| |||| ||| | || || | || |||| ||| | | || Sbjct 5239010 AGGTGGTGGCGATTGTGCCAGTGCTCGTTACATTTACACTCGCCTGTCTCCCTTTGCACG 5238951 Query 218874 CCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTC 218933 | |||| ||| | ||||||||| || || | ||| || |||||||| Sbjct 5238950 CAAGGTTTTCCACTCGGCCGATGAACCCCTACTGACGTACAACGAAGACGATGGCAAGAA 5238891 Query 218934 GATTGAGCCCGAGTGGTATGTGCCTGCTATTCC---GTTTTTGCTCGTAAATGGTGCCAA 218990 ||||||||||||| | | |||||| | || | ||||| || || ||||| | Sbjct 5238890 GATTGAGCCCGAGGTCTTTATGCCTGTCGTCCCGATGATTTTGATC---AACGGTGCGGA 5238834 Query 218991 TGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGA 219050 ||||||||| || || | ||| || || || |||||||| |||| || | | Sbjct 5238833 TGGTATCGGAACTGGTTGGAGTTCTTCTATCCCCAACTACAATCCTGAGGATGTCGTGAA 5238774 Query 219051 CAACGTCAAGCGTCTCAT 219068 ||| ||||||| || || Sbjct 5238773 CAATCTCAAGCGCCTGAT 5238756 >seq1 Length=13597520 Score = 84.2 bits (92), Expect = 4e-11 Identities = 266/410 (65%), Gaps = 3/410 (1%) Strand=Plus/Minus Query 294094 CCCTCAGACTCATACTTGGTGTAAAGCTCTTCGTATTCCTTGCCATATACATCAGACAGG 294153 ||||| ||| ||||||| |||||| | ||| | |||| ||| || ||||||| |||| Sbjct 2742444 CCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGG 2742385 Query 294154 CCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTCATG 294213 || || ||||| ||| | || | ||| | | | | ||| ||||||||||| Sbjct 2742384 CCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATA 2742325 Query 294214 AATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCT 294273 || || || | ||||| ||||| || | || ||||| || | ||||| ||| Sbjct 2742324 AAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCG 2742265 Query 294274 TGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACA 294333 || || || || ||||| || | || |||| || || ||||| || | | Sbjct 2742264 TGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATA 2742205 Query 294334 GCAAAGG-ACC--CCTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAAC 294390 ||||||| ||| | || || ||||||| | | ||| | ||| ||| |||| Sbjct 2742204 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAAC 2742145 Query 294391 ACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCTCAGCCCCG 294450 || ||||||||| || || || | ||| || |||||||| | ||| | || ||| Sbjct 2742144 ACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCG 2742085 Query 294451 CGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGA 294500 |||||||| | | | ||||| || |||||| | |||||| Sbjct 2742084 GTAGCGCGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGA 2742035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836734154205