Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 179 7e-40 seq2 131 3e-25 seq3 114 2e-20 >seq1 Length=13597520 Score = 179 bits (198), Expect = 7e-40 Identities = 170/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||||||||| ||||||||||| |||||||| || ||||| Sbjct 4023734 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4023675 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || |||||||| |||||||| || || | || |||||||| ||| Sbjct 4023674 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 4023615 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | ||| ||| ||||||||||| | ||| || || Sbjct 4023614 ATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACC 4023555 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||||| || ||||| || ||||||||||||| Sbjct 4023554 TCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGACGA 4023518 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || ||||| || || |||||||| || |||||| Sbjct 4023962 CCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 4023903 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | |||||| || ||||| ||||| | ||||| ||||| ||| Sbjct 4023902 AGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGA 4023843 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| ||||| ||||| | ||| || ||||| ||||| | ||| || || Sbjct 4023842 ATGCCCTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACC 4023783 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || ||||| || ||||| ||||||||||| |||||||| Sbjct 4023782 TCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 4023736 Score = 132 bits (146), Expect = 9e-26 Identities = 139/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 11442171 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 11442112 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || || ||||| |||||||| || ||||| | ||||||| ||| Sbjct 11442111 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 11442052 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 11442051 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 11441993 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || |||||||| || || || Sbjct 9435253 CCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 9435194 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | ||||||||||| ||| Sbjct 9435193 AGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCGGGGGGA 9435134 Query 68355 ATGCCTTCCTTGTCT 68369 || || ||||||||| Sbjct 9435133 ATACCCTCCTTGTCT 9435119 >seq2 Length=10455807 Score = 131 bits (144), Expect = 3e-25 Identities = 295/441 (67%), Gaps = 12/441 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 6507822 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGC 6507881 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || ||| |||||||||||| ||||| || | | | | | ||| || || Sbjct 6507882 CAGAGAGATGGACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCC 6507941 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| |||||||| |||||||||| |||||| | ||||| Sbjct 6507942 GAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTT 6508001 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || |||||| | ||||| | ||| |||| ||| || | || | Sbjct 6508002 CATGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGG- 6508060 Query 10175 TTCCTCGACGATGCT---CTTTACCAC---GTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228 ||||||| ||| | || || || | | || | | |||| | | || Sbjct 6508061 --CCTCGACAATGATTTCCTCAACAACCTTGGGATCGGGGCGGTGGTTC---ATGTGAGA 6508115 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 |||| || | || | |||||| |||||||| || ||| | ||||||||| Sbjct 6508116 GAACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGA 6508175 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 ||| ||||| ||||| || || || || ||||||||| |||| ||| || || Sbjct 6508176 GAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCC 6508235 Query 10349 GGAGAACAGAAGACCCTCCAC 10369 ||||| | | |||||| || Sbjct 6508236 AGAGAAGAAGATACCCTCGAC 6508256 Score = 89.7 bits (98), Expect = 9e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || || || ||| | | || |||||| | |||| ||| ||||||| Sbjct 6508568 AGGTTCTCGTTGACAATACCGTCGGAGGCCGCGAAGAAGGCCAGGACGTGGGAGATGAAG 6508627 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | |||||||| |||||||| | ||||||| | ||||| | ||| | | | Sbjct 6508628 TAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 6508687 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| |||||||||| | ||| |||||||||||||||| || Sbjct 6508688 TCCTCAGCGGTCCAGAATGAGGCTTCGGCCTTCTTGTACATTTG 6508731 >seq3 Length=5401029 Score = 114 bits (126), Expect = 2e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225779 TCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCA 225838 ||||| || ||||| || ||| || || | | |||||||||||| ||||| | Sbjct 1569478 TCGTGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAGCCCTCAAGCTGCTCG 1569537 Query 225839 TTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAA 225898 || ||| ||||| | ||||| |||| || | ||||||||||||| ||| |||||| Sbjct 1569538 TTGTTAATGGCACGCATGAGGGTGGTCTTTCCGGAACCGTTGGGACCGAGGAGACCGTAA 1569597 Query 225899 TGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCA 225958 | | || ||||||| | ||| | || |||||| || |||||| |||| || || Sbjct 1569598 CGCTGACCACGCTTGAGGCGCAGGTGAGTCTGGTTCAGCAGAATCTTGGCACCGTAAGCC 1569657 Query 225959 AGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 |||||||| ||| | ||| ||||| |||||||||| Sbjct 1569658 AGGGAGAAGGTGCAGTTGCAAAGGTCAACACCCTCCTC 1569695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622342398600