Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06-
23] 5 sequences; 32,525,541 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 179 7e-40
seq2 131 3e-25
seq3 114 2e-20
>seq1
Length=13597520
Score = 179 bits (198), Expect = 7e-40
Identities = 170/217 (78%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||||||||||| ||||||||||| |||||||| || |||||
Sbjct 4023734 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4023675
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || |||||||| |||||||| || || | || |||||||| |||
Sbjct 4023674 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 4023615
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | ||| ||| ||||||||||| | ||| || ||
Sbjct 4023614 ATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACC 4023555
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | ||||| || ||||| || |||||||||||||
Sbjct 4023554 TCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGACGA 4023518
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | ||| || ||||| || || |||||||| || ||||||
Sbjct 4023962 CCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 4023903
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | |||||||| | |||||| || ||||| ||||| | ||||| ||||| |||
Sbjct 4023902 AGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGA 4023843
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| ||||| ||||| | ||| || ||||| ||||| | ||| || ||
Sbjct 4023842 ATGCCCTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACC 4023783
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || ||||| || ||||| ||||||||||| ||||||||
Sbjct 4023782 TCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 4023736
Score = 132 bits (146), Expect = 9e-26
Identities = 139/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| |||||||| ||
Sbjct 11442171 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 11442112
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | |||||||| || || ||||| |||||||| || ||||| | ||||||| |||
Sbjct 11442111 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 11442052
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 11442051 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 11441993
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || || ||||| || |||||||| || || ||
Sbjct 9435253 CCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 9435194
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | ||||||||||| |||
Sbjct 9435193 AGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCGGGGGGA 9435134
Query 68355 ATGCCTTCCTTGTCT 68369
|| || |||||||||
Sbjct 9435133 ATACCCTCCTTGTCT 9435119
>seq2
Length=10455807
Score = 131 bits (144), Expect = 3e-25
Identities = 295/441 (67%), Gaps = 12/441 (3%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 6507822 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGC 6507881
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || ||| |||||||||||| ||||| || | | | | | ||| || ||
Sbjct 6507882 CAGAGAGATGGACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCC 6507941
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | ||||||||| |||||||| |||||||||| |||||| | |||||
Sbjct 6507942 GAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTT 6508001
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||||| || |||||| | ||||| | ||| |||| ||| || | || |
Sbjct 6508002 CATGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGG- 6508060
Query 10175 TTCCTCGACGATGCT---CTTTACCAC---GTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228
||||||| ||| | || || || | | || | | |||| | | ||
Sbjct 6508061 --CCTCGACAATGATTTCCTCAACAACCTTGGGATCGGGGCGGTGGTTC---ATGTGAGA 6508115
Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288
|||| || | || | |||||| |||||||| || ||| | |||||||||
Sbjct 6508116 GAACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGA 6508175
Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348
||| ||||| ||||| || || || || ||||||||| |||| ||| || ||
Sbjct 6508176 GAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCC 6508235
Query 10349 GGAGAACAGAAGACCCTCCAC 10369
||||| | | |||||| ||
Sbjct 6508236 AGAGAAGAAGATACCCTCGAC 6508256
Score = 89.7 bits (98), Expect = 9e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682
|||||||| | || || || ||| | | || |||||| | |||| ||| |||||||
Sbjct 6508568 AGGTTCTCGTTGACAATACCGTCGGAGGCCGCGAAGAAGGCCAGGACGTGGGAGATGAAG 6508627
Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742
| |||||||| |||||||| | ||||||| | ||||| | ||| | | |
Sbjct 6508628 TAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 6508687
Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
||||| |||||||||| | ||| |||||||||||||||| ||
Sbjct 6508688 TCCTCAGCGGTCCAGAATGAGGCTTCGGCCTTCTTGTACATTTG 6508731
>seq3
Length=5401029
Score = 114 bits (126), Expect = 2e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225779 TCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCA 225838
||||| || ||||| || ||| || || | | |||||||||||| ||||| |
Sbjct 1569478 TCGTGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAGCCCTCAAGCTGCTCG 1569537
Query 225839 TTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAA 225898
|| ||| ||||| | ||||| |||| || | ||||||||||||| ||| ||||||
Sbjct 1569538 TTGTTAATGGCACGCATGAGGGTGGTCTTTCCGGAACCGTTGGGACCGAGGAGACCGTAA 1569597
Query 225899 TGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCA 225958
| | || ||||||| | ||| | || |||||| || |||||| |||| || ||
Sbjct 1569598 CGCTGACCACGCTTGAGGCGCAGGTGAGTCTGGTTCAGCAGAATCTTGGCACCGTAAGCC 1569657
Query 225959 AGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
|||||||| ||| | ||| ||||| ||||||||||
Sbjct 1569658 AGGGAGAAGGTGCAGTTGCAAAGGTCAACACCCTCCTC 1569695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622342398600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |