Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06-
23] 5 sequences; 32,525,541 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 8e-24
>seq1
Length=13597520
Score = 125 bits (138), Expect = 8e-24
Identities = 162/220 (74%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||||||||| |||| ||||||||||| || || ||||| || | ||||| || |
Sbjct 4024179 ACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCC 4024120
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || ||||||||||||||||| || || ||||||||||| | || | | ||||||
Sbjct 4024119 GTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTT 4024060
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168
|||| || | || | | | ||| | | | ||||| |||| || || || | ||
Sbjct 4024059 GTCC-TGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTC---TCGACCTCTAGCG 4024004
Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| || || || || || ||||| |||||||| |||||
Sbjct 4024003 TGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 4023964
Score = 96.9 bits (106), Expect = 4e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| || || ||||| || ||| || || | || || |||||||| || ||||| |
Sbjct 11442173 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 11442114
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| || ||||| ||||| | || | || |||||||||| ||| || |||| ||| |
Sbjct 11442113 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 11442055
Query 42139 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||||||||| || ||||||| || ||||| || ||||| || ||||| ||
Sbjct 11442054 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 11441995
Query 42198 AA 42199
||
Sbjct 11441994 AA 11441993
Score = 91.5 bits (100), Expect = 2e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || | || ||| | ||||| || | ||| ||| || || || ||||| || |
Sbjct 4023735 ACCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGA 4023676
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|||||| || |||| || | |||||| || ||||| || || ||||||||||||| ||
Sbjct 4023675 CAGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGG 4023616
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| || |||||||||| ||| | || | | | ||| | | | ||||| || || |
Sbjct 4023615 AATGCCCTCCTTGTCC-TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAA 4023557
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| |||| ||||| || || || || || ||||| ||
Sbjct 4023556 CCTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGAC 4023520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212766049200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |