Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 179 5e-40 seq2 125 9e-24 >seq1 Length=13597520 Score = 179 bits (198), Expect = 5e-40 Identities = 561/860 (65%), Gaps = 9/860 (1%) Strand=Plus/Minus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || ||||||| || ||||| || || |||| |||||| || ||||||| || Sbjct 2742666 GGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATG 2742607 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || |||| || || || ||| || |||| |||||| || || ||| || Sbjct 2742606 ATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTG 2742547 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || ||||||||||||||||| | || | || ||||| || |||| || |||||| Sbjct 2742546 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATG 2742487 Query 116605 GCCTTCCATACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || | ||| | | | | | || | | || | | | || ||||| | ||||||||| Sbjct 2742486 GCATACCAGAGTTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCTTGCTCGTACTT 2742428 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGG 116723 | ||| ||||| || ||||| || || | || | || || || |||| | || Sbjct 2742427 GGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGG 2742368 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 |||||||| | ||| | ||| ||||||| |||||||| |||||||| ||| |||| Sbjct 2742367 GCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCA 2742308 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 || || |||| || || || ||| | || || | || || || |||| || Sbjct 2742307 CAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATC 2742248 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 | || || | || ||| ||||||||||| |||||||| | || | | || ||| Sbjct 2742247 GAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCG 2742188 Query 116904 ---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAAT 116960 |||| |||||| ||||| | || || |||||| || || ||||| |||| Sbjct 2742187 CTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAAC 2742128 Query 116961 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTG 117020 ||||| | || ||| || || || | ||| ||| | | || | | ||| Sbjct 2742127 AATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTG 2742068 Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080 || | || ||| ||||| || || ||| ||||| || || | ||||| | | Sbjct 2742067 GACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATC 2742008 Query 117081 GTAGATCCCATCGATCGAGTCA-CCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTG 117139 ||||| || ||||| |||| | || || | | | |||||||| | | || | Sbjct 2742007 ATAGATACCCTCGATGCTGTCAGCGCTCATGT-CAACCAGGAAGCAAGATGCAAGCTGGG 2741949 Query 117140 GCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGAC 117198 | || ||| | || ||||| || || || | |||||| |||| ||| | |||||| Sbjct 2741948 GTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAA-GTACTTCTGGGAC 2741890 Query 117199 ATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACC 117258 ||| | ||| ||||| | | | |||||| || ||||| || |||| | || Sbjct 2741889 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACA 2741830 Query 117259 CGCATAAACATGTATTGGGG 117278 ||||| | || || ||||| Sbjct 2741829 CGCATCAGCAAGTGCTGGGG 2741810 Score = 93.3 bits (102), Expect = 5e-14 Identities = 327/503 (65%), Gaps = 27/503 (5%) Strand=Plus/Minus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 || || || || || || || | |||||| | ||| || | ||| ||||| || | Sbjct 6788044 CGGTCGAATCGTCCGGGACGCATGAGGGCCTTGTCGAGAACATCCGGTCGGTTGGTACCA 6787985 Query 12762 GCGATGACAACGA--TGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGAT 12819 || | |||||| | ||| || | ||| ||| |||||||||||||| | | || | Sbjct 6787984 GCCAGGACAACCACTTGCTCGGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 6787927 Query 12820 TGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACC--CGCACTGCGTTGCT---- 12873 ||| || |||||| ||||| || | |||||| || | | ||||| Sbjct 6787926 TGAGAGTACTTTCACGCTCATCGTTTCC------ACCACCGACGTTCGACTTTGCTCGGG 6787873 Query 12874 ---TACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAA 12930 | || | |||||||| || |||||||| | ||| || || || | |||||| Sbjct 6787872 ATTTTCCAATAGCGTCAATCTCATCAATGAAGATGATGCAGGGGGTGTTCTTTCGGGCAT 6787813 Query 12931 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 12990 | |||| ||| || || | || ||||||||| |||||||| || || || | || Sbjct 6787812 TGGCGAAGAGATCGCGGACACGAGAGGGACCGACACCGACAAACATTTCAACGAATTCGG 6787753 Query 12991 --CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAG 13048 | | || || || | ||| || ||| |||||||| || |||| || || | Sbjct 6787752 AACCACTGA-CACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGCAA 6787695 Query 13049 GGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 13106 ||||| || || || || || | ||| | ||||||||| || ||| | ||||| | Sbjct 6787694 TGTCTTACCAGTACCGGGAGGACCTGAGAGGATGGCACCACGGGGAATCTTTGCACCCAA 6787635 Query 13107 CTTCCAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGATTTCTTCCAATTCATCCTTC 13166 |||| | | ||||||||||| | || ||| |||| ||| | ||| |||| Sbjct 6787634 CTTCTCGA--ACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 6787577 Query 13167 GCGGCGTCGATGCCTTCAACGTC 13189 || |||| ||||| ||||||| Sbjct 6787576 GCCTCGTCCATGCCCGCAACGTC 6787554 >seq2 Length=10455807 Score = 125 bits (138), Expect = 9e-24 Identities = 111/139 (80%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||||||||||||||| ||||| || || || ||||| ||||| ||||| || || Sbjct 6508140 GTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCC 6508199 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||||| |||||| || | | |||||||||||||||||||| ||||| ||| Sbjct 6508200 ACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 6508259 Query 127651 CGCGAACGCAAATAGACGC 127669 ||||| |||| |||||| Sbjct 6508260 GGCGAAGGCAACCAGACGC 6508278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507161655800