Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 174 2e-38 seq1 123 2e-23 >seq2 Length=10455807 Score = 174 bits (192), Expect = 2e-38 Identities = 204/275 (74%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 |||||||||||||| || || | || ||||| | ||||||||| || || ||| Sbjct 6508454 TAGGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATTATCTGGAAG 6508513 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| || |||||| ||||| || ||| | ||||||||| || || || Sbjct 6508514 CCGTAGAAGCAACGGGCCTCGGGGACCTGGACCTCTGCACTGAAACGCTCAACGAGGTTC 6508573 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 |||||||| || |||||| ||| ||||| |||||||| ||||| |||||| | ||| Sbjct 6508574 TCGTTGACAATACCGTCGGAGGCCGCGAAGAAGGCCAGGACGTGGGAGATGAAGTAACGC 6508633 Query 133348 TCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 || | |||||||| ||| | ||||||| | |||||||| || || | |||||| Sbjct 6508634 TCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCA 6508693 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || || ||||| || |||||||| Sbjct 6508694 GCGGTCCAGAATGAGGCTTCGGCCTTCTTGTACAT 6508728 >seq1 Length=13597520 Score = 123 bits (136), Expect = 2e-23 Identities = 141/186 (76%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| |||| |||||| | | ||||| | | Sbjct 11441993 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 11442052 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| || ||| | ||||||||||| | Sbjct 11442053 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCC 11442110 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | |||||||| | ||||||||||||||| | Sbjct 11442111 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 11442170 Query 38431 AGGAAG 38436 ||| || Sbjct 11442171 AGGTAG 11442176 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| |||||||| || || | || |||||| | || Sbjct 4023736 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 4023795 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| || || ||||| ||||| |||| ||| Sbjct 4023796 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 4023855 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| ||||| ||||| || || | || || ||| |||||||||| Sbjct 4023856 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 4023915 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || || | || || ||| Sbjct 4023916 ATCCAGAAGGAATCCACCCTCCACCTTGTCCTCCGT 4023951 Score = 114 bits (126), Expect = 1e-20 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || || || ||||| | || |||||| | | Sbjct 4023964 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 4024023 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | | || || | ||| ||||| ||||| |||||| | ||||| Sbjct 4024024 GACACTATCGACAACGTTAAGAGCAAGA-TCCAGGACAAGGAGGGTATTCCCCCTGACCA 4024082 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || |||||||| |||| || || || |||||||| Sbjct 4024083 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAA 4024142 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| || ||||| ||||| ||||| || | ||||||| Sbjct 4024143 CATCCAGAAGGAGAGC-ACCCTGCACCTGGTGTTGCGTCTGCGTGGCGGCC 4024192 Score = 105 bits (116), Expect = 7e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || || ||| ||| ||| | | | | |||| | || Sbjct 4023247 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAACG-TCAAG 4023305 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || |||| ||||| ||||| || || | ||||||||||| | || | ||| ||| Sbjct 4023306 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGC 4023365 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 || |||||||| |||| || || || ||||||||||||||| ||||| | || || Sbjct 4023366 AAGCAGCTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTC 4023425 Query 38445 CATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| || || | | |||||| Sbjct 4023426 CACTTGGTTCTTCGCCTCCGTGGCGGC 4023452 Score = 105 bits (116), Expect = 7e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| || || || || || || || ||||| |||| || ||| | | |||| | | Sbjct 4023518 TCGTCAAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCG 4023577 Query 38314 A-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | |||| |||| || || | ||||| ||||| |||||| ||||||| ||||| || Sbjct 4023578 ACAACG-TTAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTT 4023636 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| ||| ||||| ||| |||| |||| || || || ||||||||||||||| || Sbjct 4023637 ATTTTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAA 4023696 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGT 38459 || | || || || ||||| || ||| Sbjct 4023697 GAGTCCACTCTACACTTGGTTCTCCGT 4023723 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| |||||| ||||||||||||| || || | ||| || || ||||| || Sbjct 9435120 GACAAGGAGGGTATTCCCCCCGACCAACAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAG 9435179 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 || | ||||| || |||||||||||||| ||||| |||| || || Sbjct 9435180 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 9435229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172768739200