Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 356 3e-93 seq3 109 7e-19 >seq1 Length=13597520 Score = 356 bits (394), Expect = 3e-93 Identities = 769/1148 (67%), Gaps = 9/1148 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| ||||| ||||| | || ||||| || || |||||||||||||| Sbjct 4274547 TCACCGGACAGGATAGCGGCCTGGACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 4274488 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || || || ||| || | || || | | | || || || ||| Sbjct 4274487 ATGGACTTGTTGGCGTCCTT---GTTGAAGAAGTCGGAGACGAGCTTCTGGATCTTGGGG 4274431 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | ||||| || | || || || || ||||| | | Sbjct 4274430 ATACGGGTGGAACCACCGACAAGGACGATCTCGTGGACGGAGGACTTGTCAATCTTGGCG 4274371 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || || || ||||| ||||| | ||| || || || Sbjct 4274370 TCACGGAGGACACGCTCAACGGGCTCCATGGTGCCGCGGAAGAGATCCTGGCAGAGCTCT 4274311 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| |||||||| ||||| || ||||| ||||| || ||| | | || || || Sbjct 4274310 TCGAAACGGGCACGGGTGATGGAGGTGTAGAAGTCAACACCCTCGAAGAGAGAGTCGATC 4274251 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || || | || || || | ||||| | || ||||| || ||||| || || || || Sbjct 4274250 TCGATAGAGGTCTGGGCAGCGGAAGAGAGGGTGCGCTTGGCACGCTCGCAAGCGGTGCGG 4274191 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| || || || || ||||| Sbjct 4274190 AGACGACGGAGAGCACGGGCGTTGGTGGTCAGATCCTTCTTGTGCTTGCGCTTGAACTCG 4274131 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | || | ||||| || |||||||||||||| || || || Sbjct 4274130 TTGACGAAGTGGTTGACCAGACGGTTGTCGAAGTCCTCACCACCCAAGTGGGTGTCACCA 4274071 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 || || || || || || |||||||| | || ||| | | | |||||||| || ||| Sbjct 4274070 GCAGTGGCCTTAACCTCGAAGATACCCTCCTCGATGGTCAGAAGAGAAACATCGAAAGTA 4274011 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 |||||||| || || || || || ||||| || | || ||||| || |||||| Sbjct 4274010 CCACCACCGAGATCGAAGATCAGAACGTTGCGCTCACCCTCGACCTTCTTGTCAAGACCG 4273951 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || || || || || || || || || ||||| ||||| || ||| || || ||||| Sbjct 4273950 TATGCAATGGCAGCGGCGGTGGGCTCGTTAATGATACGGAGGACGTTGAGACCGGCAATG 4273891 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | || || | || || || || || || ||||| |||||||| ||||| || | | Sbjct 4273890 AGACCGGCGTCCGTGGTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACAGTAATG 4273831 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || || | |||| | |||||| || | || ||| | || ||| ||| || Sbjct 4273830 ACAGCATTGTTGACGGTGCCACCGAGGTAAGCCTCAGCGGTCTCACGCATCTTGACGAGG 4273771 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| | || ||||| |||| | ||||| || | ||||| || || ||||| || Sbjct 4273770 ATCATAGCAGAGATCTCCTCAGGGGTGAACTGCTTGGCCTCACCCTTGAACTCAACCTCG 4273711 Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909 || | ||| || | ||| ||| | ||| | | ||| | ||||||||| | Sbjct 4273710 ATGACGGGCTT---GGTAGCCTTCTCGATGATCTTGAAAGGCCAGTGCTTCATATCGGCC 4273654 Query 7910 TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTT 7969 || |||| ||| ||| | || || |||||||| ||||| || || ||||| Sbjct 4273653 TGAACCTCAGCGTCGTTAAAACGGCGACCAATGAGACGCTTGGCATCGAAGACAGTGTTG 4273594 Query 7970 TTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCC 8029 | |||||||||||| ||||||||| || || || ||||| ||||| || | || Sbjct 4273593 TGGGGGTTCATGGCGACTTGGTTCTTGGCGGCATCACCGATGAGACGCTC---GGTGTCG 4273537 Query 8030 GTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACG 8089 || || ||||| |||| ||||| || || || || |||||||| ||||| ||||| | | Sbjct 4273536 GTGAAACCGACGAACGAGGGGGTGGTGCGGTTACCCTGGTCGTTGGCAATGATTTCAATG 4273477 Query 8090 CGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 ||||||| | |||| || || || || || || ||||| | ||||||||||| || Sbjct 4273476 CGGTCGTCACGGAAGACACCCACACAGGAGTAGGTGGTTCCCAGATCAATACCGACGGCG 4273417 Query 8150 TGAGTCAT 8157 ||| ||| Sbjct 4273416 GGAGCCAT 4273409 Score = 170 bits (188), Expect = 2e-37 Identities = 364/541 (67%), Gaps = 7/541 (1%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| ||||| || ||||| | | || || | |||||| | | || Sbjct 4512299 AGGTCCTCGAAACGGGCACGAGTGATGGAGGAGTTGAGGTCCTCACCGTCGAAGAGAGAG 4512240 Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| || | ||| || || | ||| | || | || ||||| || ||||| || | Sbjct 4512239 TCAATCTCGACGGTGGTCTGGGTAGCGTTG--GACAGGGTACGCTTAGCACGCTCGCAAG 4512182 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || || | |||||| || ||||| | | |||||| | ||| || | || || | Sbjct 4512181 CAGTGCGGAGACGACGGAGAGCACGAGCATCACCGGAGAGATCCTTGCCAGTCTTGCGCT 4512122 Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 ||||| | |||||| |||||| | | ||||||||| | |||||| | ||| | Sbjct 4512121 GGAACTCCTTCTTGAAGTGCTCAAGGAGGTTAGTATCGAAATCCTGACCACCAAGGTGAG 4512062 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 | || || || || || ||||| |||| ||| || | ||||| | || || |||| Sbjct 4512061 TGTCACCAGCAGTGGCCTTGACAGTGAAGACACCACCCTGGATGTTCAGCAGGGAGACAT 4512002 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTGTTCT 7598 | || ||||| ||||| || || | || || ||||| || | || ||| Sbjct 4512001 CGAAGGTACCGCCACCAAGATCGTAGATAAGGACGTTGCGCTCCTTCTCAGACTTGCCGG 4511942 Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658 |||||||||| |||||||| || || || || || || |||||||| ||| ||||| Sbjct 4511941 CGCCGAGACCGTAGGCGATAGCGGCAGCAGTAGGCTCGTTGATAATACGGAGAACGTTCA 4511882 Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 ||||||| || | | ||||| || || || || || || ||||| ||||| |||| Sbjct 4511881 GGCCAGCGATGGCACCGGCATCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAAGCCG 4511822 Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778 | || || | ||| || | | || ||||| ||||| | || |||| ||||||| Sbjct 4511821 GCACGGTAATGACAGCCTTCTCAACCTTCTTGCCGAGCTTAATCTCGGCGACCTCTTTCA 4511762 Query 7779 T 7779 | Sbjct 4511761 T 4511761 Score = 96.9 bits (106), Expect = 4e-15 Identities = 335/521 (64%), Gaps = 9/521 (2%) Strand=Plus/Minus Query 105463 TCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC 105522 ||||| || ||||||| | || ||||| | ||||| || || | || || ||| Sbjct 2742435 TCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCC 2742376 Query 105523 TGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCT 105582 | | || || || | || ||| | ||| | || |||||||| ||||| || | || Sbjct 2742375 TCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCG 2742316 Query 105583 GGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAA 105642 || |||||| || | || ||||| || | |||| || | ||| || ||| Sbjct 2742315 GGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTC 2742256 Query 105643 CGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGAC 105702 || | ||||| || |||| | |||||||||||| || || | |||| |||| || | Sbjct 2742255 CGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAA-AGGC 2742197 Query 105703 CCTTTACGACGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGT 105756 | | | ||| || | || | |||||| | |||||| |||| |||| || Sbjct 2742196 AC--CAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGC 2742139 Query 105757 AACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCA 105816 | ||| |||| |||||| | ||| | || || ||||||| ||| | || | || Sbjct 2742138 AGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCG 2742079 Query 105817 CGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCT 105876 || | ||| || | | || ||||| || || ||| ||| ||||| Sbjct 2742078 CGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTC 2742019 Query 105877 TTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGAT 105936 || | ||||| || ||||| ||||| || || | | | ||| |||||| || ||| Sbjct 2742018 TTGAGAGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGAT 2741959 Query 105937 GACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977 | | || ||| ||| ||| | |||||||||||||| || Sbjct 2741958 GCAAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGG 2741918 >seq3 Length=5401029 Score = 109 bits (120), Expect = 7e-19 Identities = 223/330 (68%), Gaps = 11/330 (3%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| || || || ||||| || || || |||| ||| Sbjct 2514793 TCGAAATCCTCACCACCAAGGTGGGTGTCACCAGCGGTAGCCAGAACCTCGAAGACACCG 2514852 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTCAAAAATGAGT 7573 ||||| | | || ||||| || ||||||||||| || || || ||||| Sbjct 2514853 TTGTCAATAGACAGAAGAGACACATCGAAGGTACCACCACCGAGATCGTAAACAATGA-- 2514910 Query 7574 ACGTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | || ||||| | |||| || |||||||| |||||||| || || || || Sbjct 2514911 -----CCTGGCGCTCGTCACCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGG 2514965 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || | || ||| || ||| || || || || || | ||||| || || || || Sbjct 2514966 CTCGTTGACAACACGGAGGACGTTGAGACCGGCGATGGTACCGGCATCCTTGGTAGCCTG 2515025 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || | ||| | |||||||| || || || || || |||| ||||| |||| || Sbjct 2515026 ACGCTGGGCGTCGCTGAAGTAGGCGGGAACGGTAACAACGGCGTGGGTGACAGTCTTGCC 2515085 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTT 7782 || || || || ||||| ||||| || Sbjct 2515086 CAGGTAGCTCTCGGCAATATCCTTCATCTT 2515115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132760304200