Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 217 2e-51 seq2 82.4 9e-11 >seq1 Length=13597520 Score = 217 bits (240), Expect = 2e-51 Identities = 543/815 (67%), Gaps = 25/815 (3%) Strand=Plus/Minus Query 110271 GACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGT 110330 |||| | ||||||| || | || || || ||||| |||| ||| || | | | Sbjct 2742676 GACAAAGGTGGGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACT 2742617 Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390 ||| || | || || || |||| ||| || || ||| ||||| ||||||||| || Sbjct 2742616 GTACTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 2742557 Query 110391 CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA 110450 || |||||| |||||||| ||||||||| | ||| ||||||| || ||||| | Sbjct 2742556 ACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGC 2742497 Query 110451 CTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGT--TGCGTTAGCGA-GACCTTC 110507 || ||||||||| | ||| | | || || || |||| || | | || || Sbjct 2742496 CTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGATGGTCTTGCG---GCCACGGCCCTC 2742440 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 | ||||||||||| ||| | | | || || |||| ||||| ||||||| || || Sbjct 2742439 TTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGG 2742380 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGAA 110624 |||| || ||| |||||||| | ||| | |||| | ||||||| | |||||| || Sbjct 2742379 AGCCTCGTTGGGGCAGAAGAGTGTCCAGT---CACCGTTGGCCTCAACGCGCTTCATAAA 2742323 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 ||||| || |||||| || |||||||||||||| |||| |||| || | ||| || Sbjct 2742322 GAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTG 2742263 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744 ||| || || || | || || | || ||| | |||||| || || || |||| ||| Sbjct 2742262 GTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGC 2742203 Query 110745 GATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 | || || | | || ||| |||||| ||||||||||| ||| || || Sbjct 2742202 AAAGGCACC---AGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAA 2742146 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 || | |||||||||| ||| || | ||| || || || || | ||| || Sbjct 2742145 CACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACC 2742086 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 | || |||||| ||||| || || ||| |||||||| || ||| || || Sbjct 2742085 GGTAGCGCGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGC 2742026 Query 110919 AC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 || | ||| |||| ||| |||| ||||| || || || || | || ||| || | Sbjct 2742025 ACAAGTCT-TGAGAGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGA 2741967 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 ||||||| | | ||| || | || || | |||||||| || || || | || || Sbjct 2741966 AGCAAGATGCAAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGG 2741907 Query 111038 TGAACAGACCT-TGGGACATCTTGTTGTATGTGTC 111071 |||| || | ||||||||| || |||||| || Sbjct 2741906 TGAA-GTACTTCTGGGACATCAAGTGGTATGTCTC 2741873 Score = 122 bits (134), Expect = 1e-22 Identities = 281/418 (67%), Gaps = 23/418 (6%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 |||||| ||||| || ||||||| |||||||| || ||||||||||||||| Sbjct 6787955 GAAACCATCCATCTCAGTGAGAATCTGGTTGAGAGTACTTTCACGCTCATCGTTTCC--- 6787899 Query 11652 CATACCACCTGCCGAACG-CTTC---------TTACCGACAGCGTCAATCTCATCGATGA 11701 |||||| | || || ||| || || | ||||||||||||||| |||| Sbjct 6787898 ---ACCACC-GACGTTCGACTTTGCTCGGGATTTTCCAATAGCGTCAATCTCATCAATGA 6787843 Query 11702 ATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTC 11761 | | ||| || || ||| || || | |||| || || || ||||| | | Sbjct 6787842 AGATGATGCAGGGGGTGTTCTTTCGGGCATTGGCGAAGAGATCGCGGACACGAGAGGGAC 6787783 Query 11762 CAACACCTACGAACATCTCAACGAAGTTTGCGGCA-GAACACTGAATGAAGGGAACATTA 11820 | ||||| || ||||| |||||||| | | || |||||| | ||| || || | Sbjct 6787782 CGACACCGACAAACATTTCAACGAATTCGGAACCACTGACACTGTA-GAAAGGCACGCCA 6787724 Query 11821 GACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGA 11880 || |||||||| |||| ||| || | |||||||| ||||| || | ||| | ||| Sbjct 6787723 GATTCACCAGCAGTGGCCTTAGCAAGCAATGTCTTACCAGTACCGGGAGGACCTGAGAGG 6787664 Query 11881 AGGGCGCCACGGGGGATCTTGGCACC--ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGA 11938 | ||| |||||||| ||||| ||||| ||||| | | ||||| || | || ||||| Sbjct 6787663 ATGGCACCACGGGGAATCTTTGCACCCAACTTC--TCGAACCGCTCGGGTTGCTGGAGGA 6787606 Query 11939 AGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 || || | ||| | || ||||||| ||| || ||| |||| |||| ||| Sbjct 6787605 AGCTAACGAATTCCATGATCTCAACCTTGGCCTCGTCCATGCCCGCAACGTCGGAGAA 6787548 >seq2 Length=10455807 Score = 82.4 bits (90), Expect = 9e-11 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||| ||||||||||||||| |||||||| |||||||||| ||| |||||||| |||| Sbjct 9076699 ATAACTCAGTTGGTTAGAGTGTGGTGCTAATAACGCCAAAGTCGAGGGTTCGACCCCCTC 9076758 Query 136776 TGGGAACAGCTTTTAGATATAtttttt 136802 ||| | || ||| ||| |||||||| Sbjct 9076759 TGGAACCACGATTTCGAT-TATTTTTT 9076784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975963189000