Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1 152 6e-31 seq2 134 2e-25 >seq1 Length=13597520 Score = 152 bits (168), Expect = 6e-31 Identities = 333/500 (67%), Gaps = 12/500 (2%) Strand=Plus/Minus Query 1628099 CGACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTC--CGTGGGCGA 1628156 ||||||| |||| ||||| | | | ||||||||| ||||| || | |||| Sbjct 2742677 CGACAAAGGTGGGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCAC 2742618 Query 1628157 CGAAAACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCT 1628215 | | || | |||||| ||||||||||| | | || | ||||||||||||| || Sbjct 2742617 TGTA--CTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAA-TAGTACCCAGGTTCTTCT 2742561 Query 1628216 GGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCT 1628275 |||| | || |||| ||| ||||||| ||||||| |||| || |||||| ||| Sbjct 2742560 GGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCT 2742501 Query 1628276 GCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGC 1628332 | ||| ||| ||||| |||||| | | || | || ||| ||| | |||| Sbjct 2742500 GGGCCTCGAGAATGGCATACCAGAGTTTCTGAGC---CTTGATGGTCTTGCGGCCACGGC 2742444 Query 1628333 CCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGC 1628392 ||| || || || |||||||| || ||||| Sbjct 2742443 CCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGC 2742384 Query 1628393 CGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAA 1628452 |||| |||||| || || ||||| | |||||| || || | | |||| ||||| Sbjct 2742383 CGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAA 2742324 Query 1628453 AGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGT 1628512 ||||||| |||||||| ||||| || ||||| || || || ||||||||| |||| Sbjct 2742323 AGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGT 2742264 Query 1628513 GGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGG 1628572 ||||||| || ||||| | |||| | |||||||||||||||||||||||| | Sbjct 2742263 GGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAG 2742204 Query 1628573 CAAAGGCGCCCTTGCGCTTG 1628592 ||||||| || ||||||| Sbjct 2742203 CAAAGGCACCAGGGCGCTTG 2742184 Score = 113 bits (124), Expect = 6e-19 Identities = 120/157 (76%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || ||||| ||||||||||| | || || |||||| Sbjct 480998 GACAGCATCGGTGGAACTGTAACATGCGTAATCCGCAACGTGCCAGTCGGACTGGGCGAG 481057 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 |||||||| || ||| | || ||| ||||| |||||| ||||| ||||| || ||| Sbjct 481058 CCGTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 481117 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 481118 AAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 481154 Score = 91.5 bits (100), Expect = 2e-12 Identities = 213/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Plus Query 18099 TGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCC 18158 ||||||||| ||| | ||||||||||||| |||| || || ||| || | Sbjct 480314 TGGCGAGTCCCACTGTCGCTCCGTCGGCTGCATCGTCGATGGATGTCCTCCGGGCCTAGA 480373 Query 18159 ACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACT 18218 | | | ||||||||||| ||||| || || |||||||| || ||||| |||| || Sbjct 480374 AATCACTGAGGCCGACATTCAGCCCCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCT 480433 Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278 | || ||||| ||||| || || ||| |||||||| ||||| ||| |||| | Sbjct 480434 CACTACCCCGCGGGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCGT 480493 Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338 ||| || ||| | || | | | | | || ||| |||||||| ||| ||||| Sbjct 480494 CACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGTCCCAAGGACTA 480553 Query 18339 TTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTACATGG 18391 | || | ||| || || | ||||| || ||||| | ||||||| ||| Sbjct 480554 CGGTGGCA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGATTTCACCTACCTGG 480612 Query 18392 CCAAGTACGGCATCAAGGC 18410 ||||||||| ||||||| Sbjct 480613 AGAAGTACGGCGTCAAGGC 480631 >seq2 Length=10455807 Score = 134 bits (148), Expect = 2e-25 Identities = 175/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 6507832 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATG 6507891 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| || |||| | ||||||| ||| | | ||||| | | | Sbjct 6507892 GACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 6507951 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||| |||||||||||||| || || ||||||||| | Sbjct 6507952 AGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTTCATGCCAAGC 6508011 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | || ||| ||||| | |||||| | ||||||||||| ||| Sbjct 6508012 AGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGGCCTCGACAATG 6508071 Query 868931 AT 868932 || Sbjct 6508072 AT 6508073 Score = 113 bits (124), Expect = 6e-19 Identities = 179/252 (71%), Gaps = 5/252 (2%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || |||||||||||||| ||| | |||| | || ||| Sbjct 6508484 GAGTGGATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGACCTGG 6508543 Query 869693 ACCTCCTTCA-TGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751 |||| || || |||| || | | ||||||||| || || |||||| ||| ||||| Sbjct 6508544 ACCT-CTGCACTGAAACGCTCAACGAGGTTCTCGTTGACAATACCGTCGGAGGCCGCGAA 6508602 Query 869752 AAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTG 869808 || ||||||||||| ||| |||| ||||| |||||| | | ||| ||||| Sbjct 6508603 GAAGGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTC 6508662 Query 869809 GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 | || | ||| || | |||||| |||||||||| ||||| |||||||| || Sbjct 6508663 GTGAAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAATGAGGCTTCGGCCTTCTT 6508722 Query 869869 GTACATCTCCCA 869880 |||||| | ||| Sbjct 6508723 GTACATTTGCCA 6508734 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | || |||||| | || || || | || |||||| | || || ||| Sbjct 3384429 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCTAAC 3384370 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || |||||||||||||||||||| |||||| || Sbjct 3384369 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 3384319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138789676585