Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-31 seq2 136 6e-26 >seq1 Length=13597520 Score = 154 bits (170), Expect = 2e-31 Identities = 270/396 (68%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 2071612 GTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGC 2071671 || |||||||||| |||||| || || |||| ||| ||||||| |||||| |||| Sbjct 2742576 GTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGG 2742517 Query 2071672 GCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAG 2071731 ||| |||||| |||| ||| || ||||| |||| | || | || | | Sbjct 2742516 TTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGAT---G 2742460 Query 2071732 GTCCT-CG--CGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCG 2071788 ||| | || | ||||||| | ||||| || || | ||||| Sbjct 2742459 GTCTTGCGGCCACGGCCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCG 2742400 Query 2071789 TGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTC 2071848 | | || ||||||||| |||||| ||||| ||||| | |||||| ||| | | Sbjct 2742399 TAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCC 2742340 Query 2071849 ACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGG 2071908 | ||||| |||||| |||||| |||||||| |||| || || || || || || Sbjct 2742339 TCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGA 2742280 Query 2071909 TTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCAC 2071968 ||||||||| ||||||||||| ||| ||||| | |||| || |||||||||||| Sbjct 2742279 ACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCAC 2742220 Query 2071969 GGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTG 2072004 |||||||||||| |||||||| || ||||||| Sbjct 2742219 GGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTG 2742184 Score = 109 bits (120), Expect = 9e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||||||||| || |||| |||||| || || ||||| || |||| |||||||| Sbjct 2742175 CTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGA 2742116 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||| || | | ||| | || | ||||| | ||| | | || Sbjct 2742115 GGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATTCAGACC 2742056 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || ||||| | ||||||||| | || || | || || || || ||||| ||||| Sbjct 2742055 GATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAGATACCCTC 2741996 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||| || ||||||| | ||| ||||| || | || || | | || | Sbjct 2741995 GATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGGGGAGTAGC 2741936 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||| || ||||| Sbjct 2741935 GGCATTGAACAGAGTGGG 2741918 >seq2 Length=10455807 Score = 136 bits (150), Expect = 6e-26 Identities = 180/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 6507824 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCA 6507883 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| || ||||| | ||||| ||||| | |||| Sbjct 6507884 GAGAGATGGACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCCGA 6507943 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| |||||||| ||||||||||||||||| || || ||||| Sbjct 6507944 GGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTTCA 6508003 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || || ||| || | || | | ||||| | |||||| | ||||||| Sbjct 6508004 TGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGGCCT 6508063 Query 794131 CGATGATGAT 794140 ||| ||||| Sbjct 6508064 CGACAATGAT 6508073 Score = 114 bits (126), Expect = 2e-19 Identities = 134/177 (76%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||| ||||| |||||||||||| ||||||| || ||| | | Sbjct 1688062 GTACTTGGTCACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGGAG 1688121 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||||||| || | |||||||||||| |||| | ||| || |||||| || || Sbjct 1688122 GATCAGGCGGACCGAGGTCTGGATCTCCCGGGAGGAGATGGTAGACTTCTTGTT-GTACG 1688180 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646 | ||||| | |||||| || ||| || |||| ||||| | ||| ||||||| Sbjct 1688181 CAGCCAGCTTGGAGGCCTCCGTAGCGACACGCTCGAAAATGTC-TGGACGAACGAGT 1688236 Score = 114 bits (126), Expect = 2e-19 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||| | || |||||| ||||||| || | || ||||||||||| || ||| Sbjct 3384429 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCTAAC 3384370 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| || ||||| |||||||||||||| |||||| || Sbjct 3384369 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 3384319 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| |||||||||||||| || ||||||||||| ||||||||||| || || Sbjct 6508442 GGCTCCTTGATATAGGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATC 6508501 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 ||||||||||| || ||||| Sbjct 6508502 ATTATCTGGAAGCCGTAGAAGCA 6508524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245868127195