Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 149 9e-30 seq1 125 1e-22 >seq2 Length=10455807 Score = 149 bits (164), Expect = 9e-30 Identities = 218/303 (72%), Gaps = 13/303 (4%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||| ||||| || |||||||| |||||| | || | Sbjct 6508738 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCATTCTGGACCGCTGAGGAGATTGATC 6508680 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| |||||| ||||| | ||| Sbjct 6508679 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 6508624 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||||| ||||| || ||| ||| ||| || || || ||||||||| | Sbjct 6508623 ATCTCCCACGTCCTGGCCTTCTT-CGCGGCCTCCGACGGTATTGTCAACGAGAACCTCGT 6508565 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | ||||||||| | || ||||| |||| || ||||| |||||||| Sbjct 6508564 TGAGCGTTTCAGTGCAGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 6508505 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || || ||||||||||| || |||||||| || || ||||||||||| ||||||| Sbjct 6508504 AATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTATATCAAGGA 6508445 Query 1456068 CCC 1456070 || Sbjct 6508444 GCC 6508442 Score = 129 bits (142), Expect = 8e-24 Identities = 187/259 (72%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| ||||||||||| | |||||| | ||||| | | || | || || || Sbjct 6508073 ATCATTGTCGAGGCCGTTGGCATCGAGCAGGAGTTCTTGACTGACGCTCTTCCCTGCGCT 6508014 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | ||||||||| ||| ||| ||||||||||||||||| || ||||| ||||||| Sbjct 6508013 CTGCTTGGCATGAACTCCAA-GCTGATGTGCCAGTACATTGAGTTC-GTCGCTGACCGCC 6507956 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | ||| |||||| | ||||| ||||| | ||||| || ||| | ||| Sbjct 6507955 TGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACTCTGCCAATCCCTTCGACTTCATG 6507897 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 6507896 GAGTCCATCTCTCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 6507837 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 6507836 AAGGCTGGTGTCATGGCCA 6507818 Score = 89.7 bits (98), Expect = 7e-12 Identities = 118/160 (74%), Gaps = 3/160 (2%) Strand=Plus/Minus Query 724984 ACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGC-GCGC 725042 ||||||| ||| | ||||| |||| || ||| || |||||| ||||| ||| Sbjct 1688236 ACTCGTTCGTCCA-GACATTTTCGAGCGTGTCGCTACGGAGGCCTCCAAGCTGGCTGCG- 1688179 Query 725043 TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATG 725102 | ||||||| || ||| | | || |||||||||||| | || ||||||||| | Sbjct 1688178 TACAACAAGAAGTCTACCATCTCCTCCCGGGAGATCCAGACCTCGGTCCGCCTGATCCTC 1688119 Query 725103 CGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| || ||||||| |||||||||||| |||||||||| Sbjct 1688118 CCCGGTGAGCTGGCCAAGCACGCCGTCTCTGAGGGCACCA 1688079 >seq1 Length=13597520 Score = 125 bits (138), Expect = 1e-22 Identities = 289/435 (66%), Gaps = 16/435 (4%) Strand=Plus/Plus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| || |||||||| ||||||||| |||||||||||||| || || | | Sbjct 2742184 CAAGCGCCCTGGTGCCTTTGCTATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAATT 2742243 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || || || ||||||||||| || ||||| || | || || || || || Sbjct 2742244 CCTCGATCTGCGGAAGAACCACGGTAA-GGAGGAGG-----TTCGTGCCCGTGACCTTTT 2742297 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| |||||||| |||||| |||||| ||| | | | || | | |||||| | Sbjct 2742298 CTACGCTCTGTGGACCCCCGACCTCTTTATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 2742357 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||||| ||||| |||||| ||||||||| || ||| |||| || || || || Sbjct 2742358 ACTCTTCTGCCCCAACGAGGCTCCCGGCCTGGCTGATGTCTACGGCGAGGAGTTCGATGC 2742417 Query 262036 CCTCTATG--AGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGACA 262092 ||| || | | ||| |||| || | || | | Sbjct 2742418 CCTTTACGCCAAGTACGAGCAAGAGGGCCGTGGCCGCAAGACCATCAAG---GCTCAGAA 2742474 Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152 |||||| |||||| ||| |||||| | |||||| || | |||| |||| ||||||| Sbjct 2742475 ACTCTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAACCCCTTCATGCTCTACAA 2742534 Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAAC 262210 ||| ||| |||| || || |||||| |||||||||| || | || ||| | ||| Sbjct 2742535 GGATGCCTGCAACAGGAAGAGTAACCAGAAGAACCTGGGTACTATTCG-CAG-CTCTAAC 2742592 Query 262211 CTGTGCACCGAGATC 262225 |||||||| |||||| Sbjct 2742593 CTGTGCACTGAGATC 2742607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810717740810