Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=13597520 Score = 118 bits (130), Expect = 1e-21 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | | |||||||| || | || |||||||| || |||||||| || | Sbjct 4024190 CCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 4024131 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| |||||||||||||| || || || | ||||||||||| | ||| Sbjct 4024130 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 4024071 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | | |||||||||| |||||| ||| | |||| | | ||||| |||| || Sbjct 4024070 ATACCCTCCTTGTCCTGGATCTTGCTCTT-AACGTTGTCGATAGTGTCTGAGCTC---TC 4024015 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | |||||| || || || |||| ||| || ||||| |||||||| Sbjct 4024014 GACCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 4023964 Score = 98.7 bits (108), Expect = 9e-16 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| || |||||||| |||| || || || |||| ||| Sbjct 4023433 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 4023374 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || ||||| ||||| ||||| | ||| | | |||||||||| | Sbjct 4023373 AGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCCTGG 4023314 Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | |||| | | || ||||| || || ||||| | ||||| || || Sbjct 4023313 ATCTTCGACTTGA-CGTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTT 4023255 Query 35707 ACCCGT 35712 || || Sbjct 4023254 GCCAGT 4023249 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || ||| || | || || |||||||| || || || | Sbjct 11442173 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 11442114 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||| ||||| | || | || |||||||||| |||||| ||| | |||| Sbjct 11442113 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGAC-GTTG 11442055 Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||||||||| || || || | || || || |||||||||| || || || Sbjct 11442054 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 11441995 Query 35726 AA 35727 || Sbjct 11441994 AA 11441993 Score = 86.0 bits (94), Expect = 6e-12 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||||| | | ||||| |||| || ||| || || |||||||| |||| | Sbjct 4023734 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4023675 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| |||| |||||| || || || || | ||||||||||| | ||| Sbjct 4023674 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 4023615 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||||| ||||| ||| | |||| | | ||||| || || || Sbjct 4023614 ATGCCCTCCTTGTCCTGAATCTTGGACTT-AACGTTGTCGATGGTGTCAGATGACTCAAC 4023556 Query 35689 CTCCACCGTGATCGTTTTACCCGTCA 35714 ||| | ||||| || || || |||| Sbjct 4023555 CTCGAGAGTGATAGTCTTTCCGGTCA 4023530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793571825400