Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 250 3e-61 seq2 89.7 6e-13 >seq1 Length=13597520 Score = 250 bits (276), Expect = 3e-61 Identities = 579/866 (67%), Gaps = 19/866 (2%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||||| || |||| |||||||||||| |||||| | ||||||| | Sbjct 2742666 GGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATG 2742607 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || || ||| || |||| ||||| |||||||||||| || Sbjct 2742606 ATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTG 2742547 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| |||||||||||||||||| |||| | || ||||| ||||| | | |||||| Sbjct 2742546 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATG 2742487 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 111465 || | ||| | || | | || | |||| || |||| || ||||| |||||| Sbjct 2742486 GCATACCAGAGTTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCTCTTGCTCGTA 2742431 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| | ||| ||||| || |||||||| || | || | || || || |||| || Sbjct 2742430 CTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTT 2742371 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| || | ||| | ||| ||||||| |||||||| || ||||| || | Sbjct 2742370 GGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGT 2742311 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 |||||| | | || || || | ||| |||| || | ||| ||||| || | Sbjct 2742310 CCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAG 2742251 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 111699 || ||||| || | || ||| |||||||| ||||| || |||| || | || Sbjct 2742250 ATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGG 2742191 Query 111700 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 | ||| | ||| | || | |||||||| || ||| |||||| || || ||||| Sbjct 2742190 GCGCTTGTTA---CCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCAT 2742134 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 |||| |||||| | || || || || || | ||| ||| | || | | Sbjct 2742133 AGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAAT 2742074 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 |||| | || || ||||| || || ||| ||||| ||||| | | || Sbjct 2742073 GCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAG 2742014 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 ||| |||||||||| | ||| ||| | | || | | ||||||||| | | Sbjct 2742013 AGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAG 2741954 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 111998 ||| ||| || ||| | |||||||| || || || | ||||| |||| ||| | | Sbjct 2741953 CTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAA-GTACTTCT 2741895 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 |||||||| || ||||||||| | | | |||||||| || ||||||||||||| | Sbjct 2741894 GGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAG 2741835 Query 112059 CGACCCGCATGAACATGTACTGTGGG 112084 | || ||||| | || || ||| ||| Sbjct 2741834 CAACACGCATCAGCAAGTGCTGGGGG 2741809 Score = 89.7 bits (98), Expect = 6e-13 Identities = 209/311 (67%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 || ||||||||||||||||||| || || || || | ||||| | | |||||| Sbjct 6787861 GCGTCAATCTCATCAATGAAGATGATGCAGGGGGTGTTCTTTCGGGCATTGGCGAAGAGA 6787802 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-CA 11748 ||||| || | || ||| ||||| |||||||| || || || | | || | || Sbjct 6787801 TCGCGGACACGAGAGGGACCGACACCGACAAACATTTCAACGAATTCGGAACCACTGACA 6787742 Query 11749 CTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 ||| | ||| || || |||||||| || |||| || || | ||||| || || Sbjct 6787741 CTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGCAATGTCTTACCAGT 6787683 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATAT 11866 ||| || ||| | ||| | ||| || ||||| ||||| ||||| ||||| | | Sbjct 6787682 ACCGGGAGGACCTGAGAGGATGGCACCACGGGGAATCTTTGCACCCAACTTCTCGA--AC 6787625 Query 11867 CTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATC 11926 | ||||||||||| ||| || || | || | ||| | |||||| |||| || Sbjct 6787624 CGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTGGCCTCGTCCATG 6787565 Query 11927 CCCTCAACATC 11937 ||| |||| || Sbjct 6787564 CCCGCAACGTC 6787554 >seq2 Length=10455807 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || || || || || || ||||| ||||| ||||| || || Sbjct 6508140 GTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCC 6508199 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||| ||| | || | |||||| || ||||||||||||||||| ||| Sbjct 6508200 ACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 6508259 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || |||| || || ||||||| Sbjct 6508260 GGCGAAGGCAACCAGACGCGAAGCGAAGG 6508288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031960748000