Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 217 4e-51 seq3 95.1 4e-14 >seq1 Length=13597520 Score = 217 bits (240), Expect = 4e-51 Identities = 925/1450 (64%), Gaps = 15/1450 (1%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | || || ||| | || || || || || ||||| | ||| | | | || | Sbjct 4273416 CCGCCGTCGGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGACGACC 4273475 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| || || || |||||| | || || || || | ||| | || | Sbjct 4273476 GCATTGAAATCATTGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCA 4273535 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || |||| || || || | | Sbjct 4273536 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACA 4273595 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAAT 349436 | || || || ||||| ||||| || |||||| | ||||| ||| || Sbjct 4273596 ACACTGTCTTCGATGCCAAGCGTCTCATTGGTCGCCGTTTTAACGACGCTGAGGTTCAGG 4273655 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 | ||| | || || | ||||| | | | || | ||| | | || || | || | Sbjct 4273656 CCGATATGAAGCACTGGCCTTTCAA-GATCATCGAGAAGGC--TACCAAGCCCGTCATCG 4273712 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 ||||||| | || ||||| || || || || || || || || | ||| | Sbjct 4273713 AGGTTGAGTTCAAGGGTGAGGCCAAGCAGTTCACCCCTGAGGAGATCTCTGCTATGATCC 4273772 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || ||| || | ||||| || || | |||| || || | ||||||| | Sbjct 4273773 TCGTCAAGATGCGTGAGACCGCTGAGGCTTACCTCGGTGGCACCGTCAACAATGCTGTCA 4273832 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 ||||||| || ||||| || || || | |||||| || || | || || || || Sbjct 4273833 TTACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCACGGACGCCGGTCTCA 4273892 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || | || || || | || ||||| || ||||| || || || |||||||| | Sbjct 4273893 TTGCCGGTCTCAACGTCCTCCGTATCATTAACGAGCCCACCGCCGCTGCCATTGCATACG 4273952 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | ||||| || | | || || || |||| || || ||| | |||||||||| Sbjct 4273953 GTCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTTCTGATCTTCGATCTCGGTGGTGGTA 4274012 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 |||| ||||| || || || || | || ||||| || || || ||||| || ||||||| Sbjct 4274013 CTTTCGATGTTTCTCTTCTGACCATCGAGGAGGGTATCTTCGAGGTTAAGGCCACTGCTG 4274072 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| || || || || || ||||| || || || || || | Sbjct 4274073 GTGACACCCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTCAACG 4274132 Query 349917 AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 | || ||||| ||||| || | ||| | || | | || | ||||| || Sbjct 4274133 AGTTCAAGCG-CAAGCACAAGAAGGATCTGACCACCAACGCCCGTGCTCTCCGTCGTCTC 4274191 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | || || || || ||||| ||||| || | || || || |||| |||||||| || Sbjct 4274192 CGCACCGCTTGCGAGCGTGCCAAGCGCACCCTCTCTTCCGCTGCCCAGACCTCTATCGAG 4274251 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || ||||| || || || |||| | || || || ||||| || || ||| Sbjct 4274252 ATCGACTCTCTCTTCGAGGGTGTTGACTTCTACACCTCCATCACCCGTGCCCGTTTCGAA 4274311 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 || | || |||||| || | | || ||||| || || || || | || Sbjct 4274312 GAGCTCTGCCAGGATCTCTTCCGCGGCACCATGGAGCCCGTTGAGCGTGTCCTCCGTGAC 4274371 Query 350156 G-CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214 | ||| | || | | || | | | || | || | || |||||||| || ||||| Sbjct 4274372 GCCAAGATTGACAAGTCCTCCG-TCCACGAGATCGTCCTTGTCGGTGGTTCCACCCGTAT 4274430 Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA-ACCTTCTAGATCAA 350273 || || | || || | | || || || || || ||| || || | || || | Sbjct 4274431 CCCCAAGATCCAGAAGCTCGTCTCCGACTTCTTCAA---CAAGGACGCCAACAAG-TCCA 4274486 Query 350274 TTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAA 350333 | || || ||||| || ||||| || ||||| || || ||||| |||| | || || Sbjct 4274487 TCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCCGCTATCCTGTCCGGTG 4274546 Query 350334 ATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTG 350390 | || ||| || | | || | | || || ||||| |||| ||||| || | Sbjct 4274547 ACCAGTCTTCCAAGTCCACCAACGAGATCCTGCTTCTCGATGTCGCTCCTCTTTCCCTCG 4274606 Query 350391 GATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTA 350450 | | || || |||||| || |||||| | | ||| | || | ||| | || | Sbjct 4274607 GTATTGAGACCGCTGGTGGTGTCATGACTCCTTTGATTAAGCGCAACACCACTATCCCCA 4274666 Query 350451 CAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAG 350510 | || |||||| | || || || || | | || || ||||| | || || || | Sbjct 4274667 CCAAGAAGTCCGAGACCTTCTCCACCTACTCCGACAACCAGCCCGGTGTCCTGATCCAGG 4274726 Query 350511 TATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAA 350570 | || || ||||| ||||||||||| || || || || || ||| | || || | Sbjct 4274727 TCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTCCTCGGAAAGTTCGAGCTTA 4274786 Query 350571 GTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATT 350630 || ||||| || || | || ||||| ||| |||| ||| | || ||| ||||| Sbjct 4274787 CTGGCATTCCCCCCGCTCCCCGTGGTGTTCCCCAGGTTGAGGTCACCTTTGATGTTGATG 4274846 Query 350631 CAAATGGTAT 350640 | || ||||| Sbjct 4274847 CCAACGGTAT 4274856 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || || || || || || || || || || || Sbjct 4023966 CATACCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 4023907 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||| || ||||||||||| || || || || ||||| ||||| || ||||| || Sbjct 4023906 GGAGAGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGG 4023847 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || ||||| || || || | || |||||||| || | || |||| || Sbjct 4023846 AGGAATGCCCTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTC 4023787 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || |||||||||| || || || || || || || || ||||||||||| Sbjct 4023786 GACCTCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 4023736 Score = 118 bits (130), Expect = 3e-21 Identities = 104/129 (81%), Gaps = 3/129 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 |||||||||||| | || || ||| || || | |||||||||||||||||||| || Sbjct 10113046 CGTGGCACACCAAGCGTGACGTTC---TTGGACGACACACCAGCAAAGTGGAAAGTGTTC 10112990 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | |||||| | |||||||||||| ||||| || |||| |||||| |||||||| Sbjct 10112989 AGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGGGCCGCAAGAACGCCGACCATTTCA 10112930 Query 377578 CCAGGATTG 377586 ||||| ||| Sbjct 10112929 CCAGGGTTG 10112921 Score = 116 bits (128), Expect = 1e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||||| | ||||| | || ||||| |||||||| || || || || || Sbjct 4023738 CATACCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTC 4023679 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || | || || || || || || ||||| ||||| || || Sbjct 4023678 GGACAGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGG 4023619 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || | || || || || || | ||||||| || Sbjct 4023618 GGGAATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTC 4023559 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| || || || | ||||||||||| || || || || Sbjct 4023558 AACCTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGAC 4023520 Score = 100 bits (110), Expect = 9e-16 Identities = 170/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || |||||||||| ||| || || ||||||||||| | ||| |||||||| |||| Sbjct 10112257 ATGTAACCAGTTTCGGCAGTCTTGACAGCAGTATCAATCAGACCCTCACGACCAGCCATG 10112198 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 || |||||||| || ||||||||||| | |||| || |||| |||||| ||||| Sbjct 10112197 GCGTGGAAGAAGAACTCAGTAGGAGTCAAGCCACGAAGGTATGAGTTCTCAACGAATCCA 10112138 Query 378352 CTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCA 378411 | | | || || | ||| | || || | ||||| | ||||||| || || || Sbjct 10112137 CGGGACTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGAAGGGTACGATACTTGAAGCCG 10112078 Query 378412 TATGGAATTCGTTTTCCATCAACATTCTGTTGAC---CAAGTGCAGAAACCATTTGAGCA 378468 | ||||| || || || || || |||||| | |||| |||| ||| || | | Sbjct 10112077 AACGGAATACGCTTGCCTTCCACGGACTGTTGTCCCACAAGCGCAG---TCATCTGCGAA 10112021 Query 378469 ATATT 378473 ||||| Sbjct 10112020 ATATT 10112016 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || || || || || || || | || || || || || || || || ||||| || Sbjct 4024155 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAA 4024096 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTA-CAT 140664 ||| ||||| ||||| ||||| ||||| || || || ||||| || || ||| ||| | | Sbjct 4024095 GATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTAACGT 4024037 Query 140665 TATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTA 140724 | || || | || || || || || || || | ||||||||||| || || || | Sbjct 4024036 TGTCGATAGTGTCTGAGCTCTCGACCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGA 4023977 Query 140725 CAAAAATCTGCAT 140737 |||| |||||||| Sbjct 4023976 CAAAGATCTGCAT 4023964 Score = 84.2 bits (92), Expect = 7e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | ||||| | || ||||||||||| || || || || || || Sbjct 4023455 CATGCCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 4023396 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || ||||| | ||| || || ||||| Sbjct 4023395 GGACAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGG 4023336 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||| || || || || ||||| || || | || || || || || | ||| | ||| | Sbjct 4023335 AGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATC-GCTGGACT 4023277 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 |||| ||||| || | ||||| || || Sbjct 4023276 CAACCTCAAGGGTGATGGTCTTGCCAGT 4023249 >seq3 Length=5401029 Score = 95.1 bits (104), Expect = 4e-14 Identities = 237/357 (66%), Gaps = 5/357 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGA-AGCATATTT 349590 ||||| || |||| | ||| | | | ||| |||||||| ||||| || ||| || | Sbjct 2515145 CCCGAGGAGGTTTCCGCCATGATCCTGGGTAAGATGAAGGATATTGCCGAGAGC-TACCT 2515087 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | || || || | || ||| |||| || || ||||| || | || |||||||| Sbjct 2515086 GGGCAAGACTGTCACCCACGCCGTTGTTACCGTTCCCGCCTACTTCAGCGACGCCCAGCG 2515027 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | || || || ||||| || | ||| || || | || || || | | | || || Sbjct 2515026 TCAGGCTACCAAGGATGCCGGTACCATCGCCGGTCTCAACGTCCTCCGTGTTGTCAACGA 2514967 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770 ||||| || || || || || || || ||||| || | ||||| || | | Sbjct 2514966 GCCCACCGCCGCCGCTATCGCCTACGGTCTTGACAAGACCGGTGAC---GAGCGCCAGGT 2514910 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 || ||| ||| | ||||||||||| || ||||| || || || | |||| | || Sbjct 2514909 CATTGTTTACGATCTCGGTGGTGGTACCTTCGATGTGTCTCTTCTGTCTATTGACAACGG 2514850 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 | || || ||| || || |||||||| || || |||||||| || ||||| || Sbjct 2514849 TGTCTTCGAGGTTCTGGCTACCGCTGGTGACACCCACCTTGGTGGTGAGGATTTCGA 2514793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254302929015