Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 241 1e-58 seq3 161 1e-34 >seq1 Length=13597520 Score = 241 bits (266), Expect = 1e-58 Identities = 477/700 (68%), Gaps = 6/700 (1%) Strand=Plus/Plus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||| ||| |||| ||| ||| |||||||| || ||||| | || || |||||||| Sbjct 2741872 TGAGACATACCACTTGATGTCCCAGAAGTACTTCACCCACGCTTCCCCCACTCTGTTCAA 2741931 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 || | ||| || || ||| | | ||||||||||| | |||| | |||| Sbjct 2741932 TGCCGCTACTCCCCAACCCCAGCTTGCATCTTGCTTCCTGGTTGACATGAGCGCTGACAG 2741991 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 ||||| || ||||| || || |||||| |||||| ||||||||| | ||||| Sbjct 2741992 CATCGAGGGTATCTATGATACTCTCAAGACTTGTGCCATGATCTCCAAGACCGCCGGTGG 2742051 Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 ||||||| | | || || | || | || || | ||| | || || || ||| Sbjct 2742052 TATCGGTCTGAA-TG-TCCACCGCATTCGCGCTACCGGTTCTTACATTGGTGGAACCAAC 2742109 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 ||| | || | || || || |||||||| || || || |||||||| || || || ||| Sbjct 2742110 GGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGCTATGTC 2742169 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 ||||||||||| |||||| || | || || |||||||| ||||||||||||||| Sbjct 2742170 GACCAGGGTGGTAACAAGCGCCCTGGTGCCTTTGCTATCTACCTGGAGCCGTGGCACGCC 2742229 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659 || | | || || ||||| ||||| ||| || ||| | || ||| | || |||| Sbjct 2742230 GATGTCTTCGAATTCCTCGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGTGCCCGT 2742289 Query 53660 GACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGA 53718 ||||| || ||| |||||||||| || |||||||| ||| | || ||| ||| Sbjct 2742290 GACCTTTTCTAC-GCTCTGTGGACCCCCGACCTCTTTATGAAGCGCGTTGAGGCCAACGG 2742348 Query 53719 GGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGA 53778 || ||| || | ||||| |||||| |||||||| | ||||||||| ||||| Sbjct 2742349 TGACTGGACACTCTTCTGCCCCAACGAGGCTCCCGGCCTGGCTGATGTCTACGGCGAGGA 2742408 Query 53779 GTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGC 53838 ||| | | | || | ||||| ||||||| | |||| ||||||| Sbjct 2742409 GTTCGATGCCCTTTACGCCAAGTACGAGCAAGAGGGCCGTGGCCGCAAGACCATCAAGGC 2742468 Query 53839 GCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTG 53898 | | | ||| |||| || ||| || |||| ||||| || | || | |||| Sbjct 2742469 TCAGAAACTCTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAACCCCTTCATGCT 2742528 Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||||||||| | |||| |||||| |||||||||||| Sbjct 2742529 CTACAAGGATGCCTGCAACAGGAAGAGTAACCAGAAGAAC 2742568 Score = 84.2 bits (92), Expect = 2e-11 Identities = 166/242 (69%), Gaps = 9/242 (4%) Strand=Plus/Plus Query 55689 ACGGGGGGTCCGTCCAGA--ATCTGGAGATTCCTCTGCG-TCTCAAGGAGATTTACCGGA 55745 |||| || |||||||||| ||| | ||| | || | |||||| | ||| || Sbjct 2743299 ACGGTGGTTCCGTCCAGAACATCCCTAACATCCCCGCCGATATCAAGGCCCTGTACAAGA 2743358 Query 55746 CGGTGTGGGAGATTCCACAG---AAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGT 55802 | || |||||||| | ||| || | |||| | ||| || || || ||||| | Sbjct 2743359 CCGTCTGGGAGATCTCCCAGCGCAACATTCTG---CAGATGGCCGCCGACCGCGGTGCCT 2743415 Query 55803 ACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGA 55862 ||||||| ||||| ||||| || |||||| | | || | ||| | ||| |||| | | Sbjct 2743416 ACATCGATCAGTCGCAGTCCCTTAACATCCACCTTAAGGAGCCTACTATGGGCAAGCTCA 2743475 Query 55863 GCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGA 55922 | |||||||| || ||||||| ||| || ||||| || |||||||| ||||| | Sbjct 2743476 CCAGCATGCACTTCGCTGGCTGGAAGATGGGTCTGAAGACCGGCATGTACTACCTGCGTA 2743535 Query 55923 CC 55924 || Sbjct 2743536 CC 2743537 >seq3 Length=5401029 Score = 161 bits (178), Expect = 1e-34 Identities = 312/456 (68%), Gaps = 12/456 (3%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||||||||| || ||||| || |||| ||||||||| |||||||| | ||| | Sbjct 5238819 CCAGTTCCGATACCATCCGCACCGTTGATCAAAATCATCGGGACGACAGGCATAAAGACC 5238878 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | || | || ||||| | |||| | || | | | || || Sbjct 5238879 TCGGGCTCAATCTTCTTGCCATCGTCTTCGTTGTACGTCAGTAGGGGTTCATCGGCCGAG 5238938 Query 117272 TCGAATATGTTCTTG-GTCCAC--GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 | ||| | |||| || || || | ||||||||| |||||||||||| || ||| Sbjct 5238939 TGGAAAAC---CTTGCGTGCAAAGGGAGACAGGCGAGTGTAAATGTAACGAGCACTGGCA 5238995 Query 117329 GCATCCTTGCCACCAGCA---AGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTC 117385 ||| ||||||| | || || ||||||| | |||||| ||||||| | ||| Sbjct 5238996 CAATC---GCCACCACCTTGGAGTCGACTACCGAAATTTCCACTGGGCTCCAGGCAGTTG 5239052 Query 117386 AGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCC 117445 | |||||||| ||| |||||| | ||||| | || || || || ||| | Sbjct 5239053 ATGTTGTTGGAGCCAACAAAGGTCTGAGCAAGACCAACGATAGTCTGCTGCAGGGAGACA 5239112 Query 117446 TCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATG 117505 ||||| || || || || ||| | | || | || ||||||| | ||||||||||| Sbjct 5239113 TCACCGTGATGGTAGGCTGTCATTCCGGATACATGACCTGCCAGCTCAACCACCTTCATG 5239172 Query 117506 TCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGA 117565 || | | ||||| || |||| | || |||||||||||| | |||||||| | Sbjct 5239173 TCCTTCTTTAGGTTGCGGCGGAAACAGGTGTGAAGCACCTTGCGCTGTCCTGGCTTCAAA 5239232 Query 117566 CCATCCGCCACGTGAGGGATCGAACGCTTGATGTCC 117601 |||||| | ||| |||||||||||||| | | ||| Sbjct 5239233 CCATCCACAACGGAAGGGATCGAACGCTGGTTATCC 5239268 Score = 125 bits (138), Expect = 8e-24 Identities = 307/457 (67%), Gaps = 14/457 (3%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAA- 151934 || || ||||| || || |||||||||| || ||||||||| || | ||| | |||| Sbjct 5238819 CCAGTTCCGATACCATCCGCACCGTTGATCAAAATCATCGGGACGACAGG--CATAAAGA 5238876 Query 151935 -CTCCGGCTCCACCTG-TTGAC--CGTCATCCATCACGTATTTCAAAACGGAATTGTCAG 151990 ||| ||||| | || ||| | |||| || | ||| ||| | || | || | Sbjct 5238877 CCTCGGGCTCAATCTTCTTGCCATCGTCTTCGTT---GTACGTCAGTAGGGGTTCATCGG 5238933 Query 151991 CCGGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050 ||| | ||| | | || | | ||| || || ||| | ||||| || | |||| Sbjct 5238934 CCGAGTGGAAAACCTTGCGTGCAAAGGGAGACAGGCGAGTGTAAATGTAACGAGCACTGG 5238993 Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110 | ||| |||||| || || | || || | |||| |||||| ||| ||||| Sbjct 5238994 CACAATCGCCACCACCTTGGAGTCGACTACCGAAATTTCCACTGGGCTCCAGGCAGTTGA 5239053 Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170 |||||||| ||| || || ||||||| | | || || || |||||| | | Sbjct 5239054 TGTTGTTGGAGCCAACAAAGGTCTGAGCAAGACCAACGATAGTCTGCTGCAGGGAGACAT 5239113 Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT--CCCGCCAACTGCGCCACCTTCAT 152228 ||||||| || || || ||| |||| ||| || || |||| || |||||||||| Sbjct 5239114 CACCGTGATGGTAGGCTGTCAT-TCCG-GATACATGACCTGCCAGCTCAACCACCTTCAT 5239171 Query 152229 GTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAA 152288 |||| || | ||||| || ||||| || || |||||||||||| ||| ||||| Sbjct 5239172 GTCCTTCTTTAGGTTGCGGCGGAAACAGGTGTGAAGCACCTTGCGCTGTCCTGGCTTCAA 5239231 Query 152289 ACCGTCCACCACGTGAGGAATCGAACGCTTGATGTCC 152325 ||| ||||| ||| ||| |||||||||| | | ||| Sbjct 5239232 ACCATCCACAACGGAAGGGATCGAACGCTGGTTATCC 5239268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215965799000