Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 259 5e-64 seq2 158 1e-33 seq3 104 3e-17 >seq1 Length=13597520 Score = 259 bits (286), Expect = 5e-64 Identities = 802/1229 (65%), Gaps = 29/1229 (2%) Strand=Plus/Minus Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599 |||||||||||| ||||| |||||||| ||| | ||||| || | | | ||||| || | Sbjct 2743028 CCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGAGAGCCAGGGTAGGTCTCATAGG 2742969 Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659 | ||| | ||||||| | || | || | | | ||| |||| || ||| ||| | Sbjct 2742968 GACCCAGCTTCTTGGCAATATCGGAGGAAGCAGTCAAGGCACCGTGGTAGATGGTCTCGA 2742909 Query 80660 AGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719 ||| |||| | | ||||| ||| ||||| | || | || || || Sbjct 2742908 AGATCTGGATGTTGAGCTGTCTCGCCTCGGGGGAATCGAATGGCAGACGCAGAGCCAGGA 2742849 Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-C 80778 | | ||||| || || | || || | ||||| |||||||| || ||| | || | Sbjct 2742848 AAGCATCAGCAAGACCGTTGACACCAAGAGCGATGGGGCGGTGACGGAAGTT-GCTCTTC 2742790 Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838 | ||||| |||| ||||| |||| |||| |||| ||||| |||| | | | Sbjct 2742789 TTCGCCTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCAAGTTGTGAACGAGA 2742730 Query 80839 ACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT-------TC-ACAA 80890 ||| | || || || || || |||||| | | | || | || |||| Sbjct 2742729 ACCTGCACGACCTCGTGGAGCTTGCCAAAGTCATACTCG--CCTCGGGCAGAGTCGACAA 2742672 Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG---CATCTGTAA 80947 | | || ||| ||||| ||||| ||||| || |||||||| |||| || ||||| Sbjct 2742671 AGGTGGGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCA-CTGTA- 2742614 Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 ||| | ||| || ||||||| ||||| ||| ||||||||||| |||||||| Sbjct 2742613 -CTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTAC 2742555 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| |||||| || ||||||||| |||| | ||| |||| |||||| ||| | || Sbjct 2742554 TCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCT 2742495 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCA 81127 ||| ||||| | ||| | | | ||||||| ||||||| ||| || | Sbjct 2742494 CGAGAATGGCATACCAGAGTTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCTTGCT 2742435 Query 81128 CATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACT 81187 | |||||||||||| | ||||||| | |||| | |||| ||| | || || Sbjct 2742434 CGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCT 2742375 Query 81188 CGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAG 81247 |||| ||||| | || |||||| || | ||| || |||||| || ||| | Sbjct 2742374 CGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGG 2742315 Query 81248 GGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGC 81307 || |||| || ||| ||| ||||| ||| || ||||||| | ||| ||||| | Sbjct 2742314 GGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCC 2742255 Query 81308 GCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACC 81367 ||| ||||| || || | || || || ||||| |||||||| || | || | | | Sbjct 2742254 GCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCAC 2742195 Query 81368 CCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACA 81424 | ||| | |||||||||| ||| || || || || |||||| ||||||| || Sbjct 2742194 CAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCA 2742135 Query 81425 TAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA 81484 |||| | ||||| | || ||||| || || | || || || | ||||| | Sbjct 2742134 TAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAA 2742075 Query 81485 --CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTT 81542 | || ||| |||||||| ||||| | ||| || ||| ||||| || Sbjct 2742074 TGCGGTGGACATT--CAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTT 2742017 Query 81543 CATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGA 81602 | || ||||| || ||||||||||| || ||||||||| || ||| || || Sbjct 2742016 GAGAGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGC 2741957 Query 81603 CATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAA 81660 | || ||| || ||| ||||||||||||| || |||| ||||| |||| || Sbjct 2741956 AAGCT--GGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTAC 2741899 Query 81661 CGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCG 81720 | ||||||| || || || || || | ||| || || ||||| || ||| Sbjct 2741898 TTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCG 2741839 Query 81721 ATAGCTACACGCATAAACATGTACTGGGG 81749 | ||| |||||||| | || || |||||| Sbjct 2741838 ACAGCAACACGCATCAGCAAGTGCTGGGG 2741810 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||||||||| || ||||| |||||||| |||||||| |||||| Sbjct 4023736 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 4023795 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||| | || || || || |||||||| |||||||| || || Sbjct 4023796 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 4023855 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || || |||| ||||| || | ||||| || Sbjct 4023856 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 4023915 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| || || || ||| | |||||||| ||||| Sbjct 4023916 ATCCAGAAGGAATCCACCCTCCACCTTGTCCTCCGTCTTCGTGGTGG 4023962 Score = 167 bits (184), Expect = 3e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| |||||||| ||||| |||||||||||| ||| | ||| | Sbjct 4023520 GTCAAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCGAC 4023579 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| | || ||||||||||||||||| ||||| || |||||||||||||| ||| Sbjct 4023580 AACGTTAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTTATT 4023639 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| | ||||| | |||||| || | ||||| || |||| || || Sbjct 4023640 TTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAAGAG 4023699 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||| || | || | ||||| || ||||| Sbjct 4023700 TCCACTCTACACTTGGTTCTCCGTCTACGTGGTGG 4023734 Score = 152 bits (168), Expect = 6e-32 Identities = 174/232 (75%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || ||||| |||||||| || || ||||| ||| || | Sbjct 4023964 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAG--AGCT 4024021 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||| || || |||||||||||||| ||||| || |||| Sbjct 4024022 CAGACACTATCGACAACGTTAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACC 4024081 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||||||||| || ||||| | ||||| || | ||||| | Sbjct 4024082 AGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACA 4024141 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | |||| ||||| ||| || || || || |||||||| || || || || Sbjct 4024142 ACATCCAGAAGGAGAGCACCCTGCACCTGGTGTTGCGTCTGCGTGGCGGCCA 4024193 Score = 129 bits (142), Expect = 7e-25 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||||||||| | |||| ||| | || | ||| | Sbjct 4023249 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAACGTCAAGTCG 4023308 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || ||||| ||||| |||||| | || || || || ||| Sbjct 4023309 AAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGCAAG 4023368 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 || || ||||| | |||||| || | ||||| || |||| ||||| || ||||| || Sbjct 4023369 CAGCTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCA 4023427 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 11441993 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 11442052 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| || || || ||||| ||||| || Sbjct 11442053 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCCTG 11442112 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| ||| ||||| || |||| || Sbjct 11442113 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 11442171 Query 27594 GG 27595 || Sbjct 11442172 GG 11442173 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| || ||||| ||||| || || || ||||||||||| |||||| Sbjct 9435120 GACAAGGAGGGTATTCCCCCCGACCAACAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAG 9435179 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | ||||| || |||| ||||| || || ||||| || ||| | Sbjct 9435180 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 9435239 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 9435240 CGCCTGCGTGGTGG 9435253 >seq2 Length=10455807 Score = 158 bits (174), Expect = 1e-33 Identities = 339/503 (67%), Gaps = 9/503 (2%) Strand=Plus/Minus Query 64658 TTACTAAAAAGGCTGAATGGGCCATCCGGTGGATGAAT---CGTGGGTCGTCGTTTGGTC 64714 |||| || ||||| | ||||||||||| ||||| || |||| ||| | || | | Sbjct 6508339 TTACCAAGAAGGCCAACTGGGCCATCCGCTGGATCAACGACCGTGAGTCAACCTTCGCTT 6508280 Query 64715 AGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTA 64774 |||||| | || || ||| ||| || || || ||||| ||||| |||||| ||| | Sbjct 6508279 CGCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCA 6508220 Query 64775 TTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCT 64834 | |||||||| || ||||| ||||||||||| ||||| | || || ||||||||||||| Sbjct 6508219 TCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCT 6508160 Query 64835 CTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACA 64894 |||| |||||||| |||||| || || || | |||||| ||| | || || Sbjct 6508159 CTCGTGACGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCTCACATGAACCACC 6508100 Query 64895 AACC--ATCACATGGGACTATAATTGAT-ATAGTAAAATCGGCTGTAGAAATTGAAAAGG 64951 || ||| || || | | || || || | ||| || | || || ||| Sbjct 6508099 GCCCCGATCCCAAGGTTGTTGAGGAAATCATTGTCGA---GGCCGTTGGCATCGAGCAGG 6508043 Query 64952 AATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAAC 65011 | ||| | |||| ||| ||||| || ||| | |||||| | || | |||| | Sbjct 6508042 AGTTCTTGACTGACGCTCTTCCCTGCGCTCTGCTTGGCATGAACTCCAAGCTGATGTGCC 6507983 Query 65012 AGTATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGA 65071 |||| || || || || || || |||||||| | || | ||| |||| | Sbjct 6507982 AGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACA 6507923 Query 65072 ATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTT 65131 | ||| | ||||| || |||| |||||| | ||| |||| || ||||| ||||| | Sbjct 6507922 ACTCTGCCAATCCCTTCGACTTCATGGAGTCCATCTCTCTGGCCGGCAAGACCAACTTCT 6507863 Query 65132 TTGAAAAGAGGGTAGGTGATTAC 65154 | || ||| | || ||||| ||| Sbjct 6507862 TCGAGAAGCGTGTCGGTGACTAC 6507840 >seq3 Length=5401029 Score = 104 bits (114), Expect = 3e-17 Identities = 297/457 (65%), Gaps = 0/457 (0%) Strand=Plus/Minus Query 31954 GATATCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTG 32013 |||| | |||| || || || ||| | ||| || | ||||| ||||||||||||| Sbjct 5239267 GATAACCAGCGTTCGATCCCTTCCGTTGTGGATGGTTTGAAGCCAGGACAGCGCAAGGTG 5239208 Query 32014 ATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGC 32073 | || |||| || ||||| || ||||||||||||| ||||| | || Sbjct 5239207 CTTCACACCTGTTTCCGCCGCAACCTAAAGAAGGACATGAAGGTGGTTGAGCTGGCAGGT 5239148 Query 32074 TACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTC 32133 | || | | || ||||| || ||||| || | || || ||| || || || Sbjct 5239147 CATGTATCCGGAATGACAGCCTACCATCACGGTGATGTCTCCCTGCAGCAGACTATCGTT 5239088 Query 32134 AACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAG 32193 |||||||||| |||||| || | || ||| | |||| || ||||| |||| | Sbjct 5239087 GGTCTTGCTCAGACCTTTGTTGGCTCCAACAACATCAACTGCCTGGAGCCCAGTGGAAAT 5239028 Query 32194 TTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGT 32253 || || | || ||| ||||| ||| ||| || | |||||||| | ||| || Sbjct 5239027 TTCGGTAGTCGACTCCAAGGTGGTGGCGATTGTGCCAGTGCTCGTTACATTTACACTCGC 5238968 Query 32254 CTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAAT 32313 || | || | | |||||| ||||| || || | || || | | || | |||||| Sbjct 5238967 CTGTCTCCCTTTGCACGCAAGGTTTTCCACTCGGCCGATGAACCCCTACTGACGTACAAC 5238908 Query 32314 TTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTG 32373 || || || || | | ||||| | | ||| | || || | |||||||| ||| Sbjct 5238907 GAAGACGATGGCAAGAAGATTGAGCCCGAGGTCTTTATGCCTGTCGTCCCGATGATTTTG 5238848 Query 32374 GTGAACGGTGCAGAAGGCATCGGAACGGGGTTCAGTT 32410 | |||||||| || || |||||||| || | |||| Sbjct 5238847 ATCAACGGTGCGGATGGTATCGGAACTGGTTGGAGTT 5238811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310364355600