Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06-
23] 5 sequences; 32,525,541 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 5e-19
>seq1
Length=13597520
Score = 109 bits (120), Expect = 5e-19
Identities = 159/220 (72%), Gaps = 10/220 (5%)
Strand=Plus/Minus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|| ||||||| || || |||||||| || || || || || || | ||| || ||| ||
Sbjct 4024178 CGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCG 4024119
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189
|| || ||||| || || || || ||||||||||||||||| | ||| | | ||| |||
Sbjct 4024118 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTG 4024059
Query 39190 TCCATGAT-TTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCG 39244
||| ||| || || || | ||| | | | || || ||| ||| || || | ||
Sbjct 4024058 TCCTGGATCTTGCTCTT--AACGTTGTCGATAGTGTCTGAGCT---CTCGACCTCTAGCG 4024004
Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||| | ||||| ||||| || || |||||||| |||||
Sbjct 4024003 TGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 4023964
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| ||||| ||| |||||| || || || || |||| || || || |||| ||
Sbjct 4023716 ACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 4023657
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
| ||| ||||| || || ||||||||||||||||||| ||| | || ||| |||||| ||
Sbjct 4023656 AACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TG 4023598
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
| | | | | | ||| | | | || || ||||| || || | |||||| | ||
Sbjct 4023597 AATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTCTT 4023538
Query 39255 TCCCGTCAGCGTTTTAAC 39272
||| ||||| || || ||
Sbjct 4023537 TCCGGTCAGGGTCTTGAC 4023520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545573824565
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |