Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06- 23] 5 sequences; 32,525,541 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 149 1e-30 seq5 98.7 2e-15 seq2 89.7 1e-12 >seq1 Length=13597520 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||||||||| |||||||| || |||| ||||| |||| | || Sbjct 4023957 ACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGT 4023898 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| || |||||||| || || ||||| ||||| ||||| || Sbjct 4023897 ACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCC 4023838 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||||||||| ||||||| ||||| ||||| || | || || || | Sbjct 4023837 CTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACCTCAAG 4023778 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||| || | || || | ||| | ||||| Sbjct 4023777 TGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 4023736 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || ||||| || ||| || || |||| ||||| || | | ||| Sbjct 4024185 ACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGT 4024126 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| |||||||||||||| || || ||||| || |||||||| Sbjct 4024125 ACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACC 4024066 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||| ||||||||| | || || |||| Sbjct 4024065 CTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACCTCTAG 4024006 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 |||||| ||||| || |||| ||| || Sbjct 4024005 CGTGATAGTCTTTCCGGTCAGAGTCTT 4023979 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||||| ||||| |||| ||||| |||| || ||| | || || Sbjct 4023719 AGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCC 4023660 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || ||||| ||||| || || |||||||| ||||| || |||||||| Sbjct 4023659 TCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 4023600 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || | || || || | ||||| ||| Sbjct 4023599 TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTC 4023540 Query 225682 TTGCCCGTCA 225691 || || |||| Sbjct 4023539 TTTCCGGTCA 4023530 Score = 104 bits (114), Expect = 6e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| ||||| || | | ||| | ||||| Sbjct 9435238 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 9435179 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || ||||||||||| |||||||| ||||||||| Sbjct 9435178 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCT 9435119 Score = 95.1 bits (104), Expect = 3e-14 Identities = 184/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559 |||||||| |||| | | ||| || ||||||| |||||||| | || ||| Sbjct 2742564 TTCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCG 2742505 Query 193560 GCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTT 193619 | || || |||||||| || ||| |||| ||||| || | ||| | | | | Sbjct 2742504 GTCTGGGCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGATGGTCTTGCGGCCACGG 2742445 Query 193620 CCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGA 193679 || || ||||||||| |||| || | || || || | ||||||| || | || Sbjct 2742444 CCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGG 2742385 Query 193680 CCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATG 193739 |||||||| || || ||||| ||||| |||| || || | || || | |||||| Sbjct 2742384 CCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATA 2742325 Query 193740 AAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771 |||||||| | ||||| | ||||||||||| Sbjct 2742324 AAGAGGTCGGGGGTCCACAGAGCGTAGAAAAG 2742293 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 11442171 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 11442112 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || |||||||| || || || || |||||||| |||||||| ||| || ||| Sbjct 11442111 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 11442052 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | || || ||||| ||||||| || || | ||| Sbjct 11442051 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 11441993 >seq5 Length=27017 Score = 98.7 bits (108), Expect = 2e-15 Identities = 200/293 (68%), Gaps = 7/293 (2%) Strand=Plus/Minus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||| ||||| |||| ||||| ||| | | || || |||||| | | Sbjct 22248 ACTTTATACTTAATGTTTGCATTATTTTCAGGTTTAGTTGGAACAGCATTTTCAGTTTTA 22189 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCAACTTT 7558 || || ||||||||| ||| ||| || ||| |||| | || |||| ||| | | Sbjct 22188 ATTAGATTAGAATTATCTGGTCCAGGAGTACAATATATATCAGA--TAAT---CAATTAT 22134 Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618 | || ||| ||||| || ||||| | | |||||||||||| | |||||||| | Sbjct 22133 ATAATAGTATAATTACAGCACATGCTATATTAATGATTTTCTTTATGGTTATGCCTGCAT 22074 Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678 | ||||| ||||| || |||| || | || ||| | | || | ||| |||||||| | Sbjct 22073 TAATAGGAGGTTTTGGTAATTTCTTATTACCATTATTAGTAGGAGGTCCAGATATGGCAT 22014 Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 |||| || | || ||||| ||||| |||||| || ||| |||||| || Sbjct 22013 TTCCTAGATTAAATAATATTAGTTTCTGATTATTAGTTCCTAGTTTATTTTTA 21961 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729 |||||| || ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct 21568 TTCAGGGTGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCACCA 21625 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | | ||||| || |||||||||||||||||||||||| Sbjct 21626 GCTACTTCAAAGAATGAAGTATTAAAATTTCTATCAGTTAA 21666 >seq2 Length=10455807 Score = 89.7 bits (98), Expect = 1e-12 Identities = 124/169 (73%), Gaps = 6/169 (4%) Strand=Plus/Plus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCC 370725 ||| |||||| || ||||| ||||||||||||||| | ||||| ||||| || || || Sbjct 4598031 ATACTTCAGGGTGTCCAAAGAATCAGAATAAATGTCGGAATAAA--ATAGGGTCACCACC 4598088 Query 370726 GCCTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACAGTTGGTTTAT 370784 || | | ||||| || ||||||||| |||||||||||||| | || | ||| Sbjct 4598089 ACCAGCTACTTCAAAGAATGAAGTATTAAAGTTTCTATCAGTTAAGATCATAGTATATAT 4598148 Query 370785 CAtttttttAATTATTTTTCAGTTAATAATAATTATTACATATATGATT 370833 ||| || | ||||| |||||||| | |||||| ||| ||| ||| Sbjct 4598149 ACTTTCTTGACTTATTGTTCAGTTATTTGGTATTATTTCAT-TATTATT 4598196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531123603470