Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000710275.1_202014-06-
23] 5 sequences; 32,525,541 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 3e-20
>seq1
Length=13597520
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| || || || || || || ||||||||||| |||| | || | |||||
Sbjct 4023948 GAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATC 4023889
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || || || |||||||| || | ||| || || | | || || ||||| ||
Sbjct 4023888 TTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCCTCCTTATC 4023829
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||| || || || ||| | || | |||| || ||| || ||||| ||||||||
Sbjct 4023828 TTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACCTCAAGTGTAATAGT 4023769
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||| ||||| ||||| ||||| | ||||||
Sbjct 4023768 TTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 4023736
Score = 93.3 bits (102), Expect = 1e-13
Identities = 140/198 (71%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| |||||||| ||||||||||| |||| | ||| | || || || |
Sbjct 4023714 CAAG-TGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCCA 4023656
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| |||||||| ||||| | ||||||||| | | || || ||||| || ||||
Sbjct 4023655 ACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAA 4023596
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || || | || | | |||| || ||| || || ||||| ||||| || |
Sbjct 4023595 TCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTCTTTC 4023536
Query 152077 CCGTGAGAGTCTTCACGA 152094
| || || ||||| ||||
Sbjct 4023535 CGGTCAGGGTCTTGACGA 4023518
Score = 89.7 bits (98), Expect = 1e-12
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972
||| || ||||||||||| || | | ||| | || || || || || || |||||
Sbjct 4024155 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAA 4024096
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
|||||| | ||||||||| | | || || ||||| || || || || || || |
Sbjct 4024095 GATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTT 4024036
Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| | ||||||| ||||| || || || || ||||| || || || |||||||| ||
Sbjct 4024035 GTCGATAGTGTCTGAGCTCTCGACCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGAC 4023976
Query 152093 GAAGACCTGCAT 152104
|||| ||||||
Sbjct 4023975 AAAGATCTGCAT 4023964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820726083355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |