Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2 196 5e-45
seq975 127 2e-24
seq179 113 5e-20
>seq2
Length=351056
Score = 196 bits (216), Expect = 5e-45
Identities = 214/284 (75%), Gaps = 3/284 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| |||||||| || || |||||||||| |||||| | || ||
Sbjct 119802 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCATTCTGGACCGCTGAGGAGATTGATCTC 119861
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| ||||||| | ||| |||||||| | ||||| | ||||||
Sbjct 119862 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATCTCC 119921
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| |||||||| ||||| ||| |||||| || ||||||||||| || || ||||||
Sbjct 119922 CACGTCCTGGCCTTCTTCGCGGCCTCCGACGGTATTGTCAACGAGAACCTCGTTGAGCGT 119981
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||||| ||||||| || |||||||||||||| ||||| |||
Sbjct 119982 TTCAGTGCAGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATAATGATG 120041
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916
|||||| | ||||| || | || || ||||||||||| ||
Sbjct 120042 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTA 120085
Score = 179 bits (198), Expect = 4e-40
Identities = 313/450 (70%), Gaps = 4/450 (1%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||| | ||||| | ||||||||| || | | ||| | |||||| ||| |
Sbjct 120206 AGAAGGCCAACTGGGCCATCCGCTGGATCAACGACCGTGAGTCAACCTTCGCTTCGCGTC 120265
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||| |||||||| || |||||||| ||||||| || ||| ||||| |||| || |
Sbjct 120266 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCATCTTCT 120325
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| || ||||| ||||| || || |||||| ||||||||| ||||| | |
Sbjct 120326 GGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTG 120385
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCG 117220
|||||||||| || ||||| || ||| |||||||| || || || || |||
Sbjct 120386 ACGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCTCACATGAACCACCGCCCCG 120445
Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280
| | | | || ||| ||| | ||| || || | |||||||||| ||| |
Sbjct 120446 ATC-CCAAGGTTGTTGAGGAAATCATTGTCGAGGCCGTTGGCATCGAGCAGGAGTTCTTG 120504
Query 117281 ACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACAT 117339
|| || || || || |||| |||||| || | || | | | ||||| || |||||
Sbjct 120505 ACTGACGCTCTTCC-CTGCGCTCTGCTTGGCATGAACTCCAAGCTGATGTGCCAGTACAT 120563
Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399
||||||||||| ||| | |||||| | | || | | | ||| |||||||| | |
Sbjct 120564 TGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACTCTGC 120623
Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTC 117429
||| || | ||||| ||| | ||||||
Sbjct 120624 CAATCCCTTCGACTTCATGGAGTCCATCTC 120653
>seq975
Length=109893
Score = 127 bits (140), Expect = 2e-24
Identities = 139/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | |
Sbjct 47323 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 47264
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||||||| | ||||| || || ||
Sbjct 47263 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCCT 47205
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| ||||| || || | |||||||| | ||||||||||||||||||
Sbjct 47204 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 47145
Query 40878 GG 40879
||
Sbjct 47144 GG 47143
>seq179
Length=79788
Score = 113 bits (124), Expect = 5e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || || || || ||||| | || ||||| | |
Sbjct 52170 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 52229
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| || || | ||||| ||||| || ||| | |||||
Sbjct 52230 GACACTATCGACAACGTT-AAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCA 52288
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| || || |||||||| |||| || || || ||||||||
Sbjct 52289 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAA 52348
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| ||| ||||| || |||||||| || | ||||||
Sbjct 52349 CATCCAGAAGGAGAGCACCCTGCACCTGGTGTTGCGTCTGCGTGGCGGC 52397
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || |||||||| |||||||| || || | || ||||| | ||
Sbjct 51942 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 52001
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||| || || | || || |||||||| || | || ||
Sbjct 52002 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 52061
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| ||||| ||||| || || | || || ||| ||||||||||
Sbjct 52062 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 52121
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||| |||| || || || ||
Sbjct 52122 ATCCAGAAGGAATCCACCCTCCACCTTGT 52150
Score = 105 bits (116), Expect = 7e-18
Identities = 134/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||| ||||| ||||||||| | || || || ||| ||| | | | | |||| |||||
Sbjct 51453 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAACG-TCAAG 51511
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| || | ||||| ||||| ||||| | ||||| || || | |||| ||| |||
Sbjct 51512 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGC 51571
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| |||||||| |||| || || || |||||||||||||||||||||| | || ||
Sbjct 51572 AAGCAGCTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTC 51631
Query 40891 CA 40892
||
Sbjct 51632 CA 51633
Score = 100 bits (110), Expect = 3e-16
Identities = 140/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || || || || || || ||||| |||| || || | | |||| | |
Sbjct 51724 TCGTCAAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCG 51783
Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| |||| | ||| || |||| ||||| |||||||| ||| | |||||||| || ||
Sbjct 51784 ACAACGTT-AAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTT 51842
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|| | ||| ||||| ||| |||| |||| || || || ||||||||||||||||||
Sbjct 51843 ATTTTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAA 51902
Query 40879 GAGGCCACGCTGCA 40892
||| |||| || ||
Sbjct 51903 GAGTCCACTCTACA 51916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515211787283760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |