Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 196 5e-45 seq975 127 2e-24 seq179 113 5e-20 >seq2 Length=351056 Score = 196 bits (216), Expect = 5e-45 Identities = 214/284 (75%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||||| |||||| | || || Sbjct 119802 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCATTCTGGACCGCTGAGGAGATTGATCTC 119861 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| ||||||| | ||| |||||||| | ||||| | |||||| Sbjct 119862 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATCTCC 119921 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| ||||| ||| |||||| || ||||||||||| || || |||||| Sbjct 119922 CACGTCCTGGCCTTCTTCGCGGCCTCCGACGGTATTGTCAACGAGAACCTCGTTGAGCGT 119981 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| ||||| ||||||| || |||||||||||||| ||||| ||| Sbjct 119982 TTCAGTGCAGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATAATGATG 120041 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 |||||| | ||||| || | || || ||||||||||| || Sbjct 120042 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTA 120085 Score = 179 bits (198), Expect = 4e-40 Identities = 313/450 (70%), Gaps = 4/450 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||| | ||||| | ||||||||| || | | ||| | |||||| ||| | Sbjct 120206 AGAAGGCCAACTGGGCCATCCGCTGGATCAACGACCGTGAGTCAACCTTCGCTTCGCGTC 120265 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| |||||||| || |||||||| ||||||| || ||| ||||| |||| || | Sbjct 120266 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCATCTTCT 120325 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| || ||||| ||||| || || |||||| ||||||||| ||||| | | Sbjct 120326 GGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTG 120385 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCG 117220 |||||||||| || ||||| || ||| |||||||| || || || || ||| Sbjct 120386 ACGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCTCACATGAACCACCGCCCCG 120445 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 | | | | || ||| ||| | ||| || || | |||||||||| ||| | Sbjct 120446 ATC-CCAAGGTTGTTGAGGAAATCATTGTCGAGGCCGTTGGCATCGAGCAGGAGTTCTTG 120504 Query 117281 ACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACAT 117339 || || || || || |||| |||||| || | || | | | ||||| || ||||| Sbjct 120505 ACTGACGCTCTTCC-CTGCGCTCTGCTTGGCATGAACTCCAAGCTGATGTGCCAGTACAT 120563 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 ||||||||||| ||| | |||||| | | || | | | ||| |||||||| | | Sbjct 120564 TGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACTCTGC 120623 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTC 117429 ||| || | ||||| ||| | |||||| Sbjct 120624 CAATCCCTTCGACTTCATGGAGTCCATCTC 120653 >seq975 Length=109893 Score = 127 bits (140), Expect = 2e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | | Sbjct 47323 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 47264 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||||||| | ||||| || || || Sbjct 47263 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCCT 47205 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | |||||||| | |||||||||||||||||| Sbjct 47204 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 47145 Query 40878 GG 40879 || Sbjct 47144 GG 47143 >seq179 Length=79788 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || || ||||| | || ||||| | | Sbjct 52170 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 52229 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||| || ||| | ||||| Sbjct 52230 GACACTATCGACAACGTT-AAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCA 52288 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || |||||||| |||| || || || |||||||| Sbjct 52289 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAA 52348 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| ||| ||||| || |||||||| || | |||||| Sbjct 52349 CATCCAGAAGGAGAGCACCCTGCACCTGGTGTTGCGTCTGCGTGGCGGC 52397 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| |||||||| || || | || ||||| | || Sbjct 51942 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 52001 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | || || |||||||| || | || || Sbjct 52002 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 52061 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| ||||| ||||| || || | || || ||| |||||||||| Sbjct 52062 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 52121 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| |||| || || || || Sbjct 52122 ATCCAGAAGGAATCCACCCTCCACCTTGT 52150 Score = 105 bits (116), Expect = 7e-18 Identities = 134/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || || || ||| ||| | | | | |||| ||||| Sbjct 51453 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAACG-TCAAG 51511 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| ||||| ||||| | ||||| || || | |||| ||| ||| Sbjct 51512 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGC 51571 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || |||||||| |||| || || || |||||||||||||||||||||| | || || Sbjct 51572 AAGCAGCTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTC 51631 Query 40891 CA 40892 || Sbjct 51632 CA 51633 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || || || || ||||| |||| || || | | |||| | | Sbjct 51724 TCGTCAAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCG 51783 Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | |||| | ||| || |||| ||||| |||||||| ||| | |||||||| || || Sbjct 51784 ACAACGTT-AAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTT 51842 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| ||||| ||| |||| |||| || || || |||||||||||||||||| Sbjct 51843 ATTTTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAA 51902 Query 40879 GAGGCCACGCTGCA 40892 ||| |||| || || Sbjct 51903 GAGTCCACTCTACA 51916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515211787283760