Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq179 125 5e-24 >seq179 Length=79788 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | || ||||||||| | || || || ||||| ||||||||||| || Sbjct 52396 CCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 52337 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| |||||| || ||||| || || ||||||||||| ||| Sbjct 52336 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 52277 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | || | ||||| Sbjct 52276 ATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACC 52217 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || || ||||| ||||| || |||||||||||||| Sbjct 52216 TCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 52170 Score = 118 bits (130), Expect = 7e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||||| ||| |||||||| ||||||||||||||||| ||| |||| Sbjct 51925 AGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCC 51866 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||||||||||||| |||||||| || |||||||||||| ||| | || ||||||||| Sbjct 51865 TCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 51806 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | || || || || | ||||| || Sbjct 51805 TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTC 51746 Query 34358 TTGCCGGTGAGAGTTTTCAC 34377 || ||||| || || || || Sbjct 51745 TTTCCGGTCAGGGTCTTGAC 51726 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| |||||||||||||| || |||| | || || | ||||||||||||||| Sbjct 52133 TTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAA 52074 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||||| ||||| || ||| || | || |||||| || ||||| ||| | || Sbjct 52073 GATGAGACGCTGTTGATCGGGAGGAATGCCCTCCTTATCTTGGATCTTGGACTTCACATT 52014 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||| || ||||| || | || || |||||||| ||||| || || || Sbjct 52013 ATCGATAGTGTCGGATGACTCGACCTCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGAC 51954 Query 34378 AAAGATCTGCAT 34389 || |||||||| Sbjct 51953 GAAAATCTGCAT 51942 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || |||| ||| | |||| || ||||| ||||||||||||||| Sbjct 51657 CCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 51598 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| ||||||||| ||||| || | ||||| ||||| || Sbjct 51597 AGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGG 51538 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | |||| | || || || Sbjct 51537 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACC 51478 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| ||||| |||| Sbjct 51477 TCAAGGGTGATGGTCTTGCCAGTGA 51453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323067468006560