Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1041 165 1e-35 seq2 132 7e-26 >seq1041 Length=363390 Score = 165 bits (182), Expect = 1e-35 Identities = 733/1148 (64%), Gaps = 16/1148 (1%) Strand=Plus/Plus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 |||| || ||||| || ||||| || ||||||| || | || | || || ||| Sbjct 323511 GCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATGATCTCA 323570 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 ||||| |||||| | ||| || || | || | || |||||||| |||| || Sbjct 323571 GTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAG 323630 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 |||||||| || || ||||| || ||||||| || |||| | || | ||| || | | Sbjct 323631 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATAC 323690 Query 79795 CAGACGACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTT--TCGTATTGTGT 79850 |||| | || ||||||| || | |||| | | ||||| ||||| | | Sbjct 323691 CAGA-GTTTCTGAGCCTTGATGGT---CTTGCGGCCACGGCCCTCTTGCTCGTACTTGGC 323746 Query 79851 ATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACA 79910 || | |||||||| || || | ||||| | | || ||| |||| || || Sbjct 323747 GTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCA 323806 Query 79911 CATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 79970 | | | ||| || || | ||| || || ||||||||||| || || |||| || Sbjct 323807 GAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAG 323866 Query 79971 AGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 80029 ||| || ||| || || | || | | |||||| || || ||||| ||||||| Sbjct 323867 AGCGTAGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGA 323925 Query 80030 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTT 80089 |||| | | | ||| | |||||||| |||| ||| || || | | || || || | Sbjct 323926 GGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCT 323985 Query 80090 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 80149 |||| || ||||| || | || | |||||||| ||| | || | || ||| |||| || Sbjct 323986 TGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAA 324045 Query 80150 TACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACT 80207 |||| ||||| | || ||||| || || || || | || ||||| | Sbjct 324046 TACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGA 324105 Query 80208 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 80267 ||| ||||| || || || || | || ||||| | || || || | ||||| Sbjct 324106 CATT--CAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATC 324163 Query 80268 ATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 80327 |||||| ||||| ||||| ||| | |||||| || || || || | | ||| | Sbjct 324164 ATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGG 324223 Query 80328 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAG 80387 | ||| | ||||| || | || || |||||||| || || | || | |||| Sbjct 324224 TTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACAT 324283 Query 80388 TAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACG 80447 | | ||| |||||||| || || || ||| || || || || || ||||| Sbjct 324284 CAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACACG 324343 Query 80448 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTT 80507 ||| | || |||||| || | ||| | | || || || | | ||| || Sbjct 324344 CATCAGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAACG 324403 Query 80508 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 80567 || | || || || || || ||||||| ||||| || ||||| | ||| |||| Sbjct 324404 CTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATTGCCGA 324463 Query 80568 GTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATAC-TTGAAATAATCGGAG 80626 |||||| | || || || |||| | | ||| ||| | | |||| || || |||| Sbjct 324464 GTTGAGCTCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGGAG 324522 Query 80627 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 80686 | | || || || || || ||||| | | | | ||| || || | ||| Sbjct 324523 CAGGCTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGAGATGACCATAGAGAATT 324582 Query 80687 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAAT 80746 | |||||||||| |||||| || || || ||||| || | || || | |||||| || | Sbjct 324583 GCTTTTTTGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGT 324642 Query 80747 CTGGATGT 80754 | || ||| Sbjct 324643 CAGGGTGT 324650 >seq2 Length=351056 Score = 132 bits (146), Expect = 7e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||| ||||| || ||| ||||||||||| | | || || |||||||| Sbjct 120422 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 120363 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 120362 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCA 120303 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 || |||||||| || || || ||||| |||||||| || Sbjct 120302 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAACCAG 120265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718258465907640