Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1041 143 4e-29 seq2 111 2e-19 >seq1041 Length=363390 Score = 143 bits (158), Expect = 4e-29 Identities = 726/1144 (63%), Gaps = 20/1144 (2%) Strand=Plus/Plus Query 71704 GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAATTTCAGTG 71760 || ||||| || ||||| || ||||||| || |||| || | || || |||||| Sbjct 323517 GAAGCCAGGTTGCAAACAGCCACCTCATCAGG---GGCACTGTACTCAATGATCTCAGTG 323573 Query 71761 CAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 71820 || || ||| | || || || | || | || |||||||| |||| || ||| Sbjct 323574 CACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCA 323633 Query 71821 TCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 71880 ||||| || || || || || ||||||| || |||| | || | ||| || | |||| Sbjct 323634 TCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAG 323693 Query 71881 ACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTT--TCGTATTGTGTATAT 71937 | | || ||||||| || | || | | | ||||| ||||| | | || Sbjct 323694 A-GTTTCTGAGCCTTGATGGTCTTGCGGC--CACGGCCCTCTTGCTCGTACTTGGCGTAA 323750 Query 71938 AATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATC 71997 | |||||||| || || | ||| | | || ||| || || || || | Sbjct 323751 AGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAG 323810 Query 71998 AATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 72056 | || ||| || || | | | || || ||||||||||| || || |||| ||||| Sbjct 323811 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCG 323870 Query 72057 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 72116 || ||| || || | || | | |||||| || || ||||| ||||||||||| Sbjct 323871 TAGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAA 323929 Query 72117 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTT 72176 | | | ||| | |||||||| |||| ||| || || | | || || || ||||| Sbjct 323930 TTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTT 323989 Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 || ||||| || | || | |||||||| ||| | || | || ||| |||| |||||| Sbjct 323990 ACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 324049 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATT 72294 ||||| | || ||||| || || || || | || ||||| || ||| Sbjct 324050 GTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 324109 Query 72295 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 72354 ||||| || || || || | || ||||| | || || || | ||||||||| Sbjct 324110 --CAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAG 324167 Query 72355 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 72414 || ||||| || || ||| | |||||| || || || || | | ||| | | Sbjct 324168 ATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGG 324227 Query 72415 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474 ||| | ||||| || | || || |||||||| || || | || | |||| | Sbjct 324228 GGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATCAAG 324287 Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATT 72534 | ||| |||||||| || || || ||| || || || || || |||||||| Sbjct 324288 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACACGCATC 324347 Query 72535 AACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCC 72594 | || ||||| || | ||| | | || || || | | ||| || || Sbjct 324348 AGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAACGCTCG 324407 Query 72595 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 72654 | || || || || || ||||||| ||||| || ||||| | ||| |||| ||| Sbjct 324408 AGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATTGCCGAGTTG 324467 Query 72655 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGAATG 72713 || | || || || |||| || | ||| ||| | | |||| || || |||| | | Sbjct 324468 AGCTCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGGAGCAGG 324526 Query 72714 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 72773 || || || || || ||||| | | | | ||| || || | ||| | || Sbjct 324527 CTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGAGATGACCATAGAGAATTGCTT 324586 Query 72774 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGG 72833 |||||||| |||||| || || || ||||| || | || || |||||||| || || || Sbjct 324587 TTTTGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCAGG 324646 Query 72834 ATGT 72837 ||| Sbjct 324647 GTGT 324650 >seq2 Length=351056 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || ||| ||||| || ||| |||||||| || | | || | |||||||| Sbjct 120422 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 120363 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| || ||||| ||||||||||| || ||||| || || || || ||||| ||| Sbjct 120362 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCA 120303 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 || |||||||| || || || || || ||||||| Sbjct 120302 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 120269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671129543984760