Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq179 116 9e-21 seq2 95.1 3e-14 >seq179 Length=79788 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || ||||| || || || | || ||||| || || || || Sbjct 52138 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCTTCAAGCTGCTTGCCT 52079 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||||||||| ||||| || || || ||||| || ||||| | || Sbjct 52078 GCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCCTCCTTATCTTGGATCTTGGACTTC 52019 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || ||| | || ||||| ||||||||||| || ||||| || || Sbjct 52018 ACATTATCGATAGTGTCGGATGACTCGACCTCAAGTGTAATAGTTTTGCCAGTGAGCGTC 51959 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 51958 TTGACGAAAATCTGCAT 51942 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 |||| || || |||||||| || || ||||| || ||||| | |||||| || | || Sbjct 51916 TGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCCAACTGC 51857 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || || ||||| || | ||| || || || || || || || || ||||||||||| Sbjct 51856 TTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 51797 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || || || || | ||| || | || ||||| || || |||||||| || || Sbjct 51796 GACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTCTTTCCGGTC 51737 Query 104537 AGTGTTTTTAC 104547 || || || || Sbjct 51736 AGGGTCTTGAC 51726 >seq2 Length=351056 Score = 95.1 bits (104), Expect = 3e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| || |||||||| || ||||| ||||| || || || || || | ||||| ||| Sbjct 120268 GTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCATCTTCTGG 120327 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||| | ||||| ||||| || | |||||||| ||||| |||| | ||| Sbjct 120328 CTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGAC 120387 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284 || ||| | ||| |||||||||||| Sbjct 120388 GAGGGTCTCCACACTGACTTCGCTTGT 120414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151381420111908