Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq173 190 3e-44 seq564 167 4e-37 >seq173 Length=81070 Score = 190 bits (210), Expect = 3e-44 Identities = 204/267 (76%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||||| | || || |||||||| |||||||||||||| || || Sbjct 31952 GCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGAATCACCAAGCCTGCCAT 31894 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || || |||||||| ||||||||| |||| | || |||||||||||| Sbjct 31893 CCGTCGTCTCGCCCGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTATGAAGAGAC 31834 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | |||| |||||| || |||| |||| ||| || || ||| ||||| Sbjct 31833 CCGCGGTGTGCTCAAGACCTTCCTTGAGTCCGTAATCCGTGACGCCGTCACCTACACCGA 31774 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||||||| | || ||||||| || | || || || || Sbjct 31773 GCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTACGCCCTCAAGCGCCAGGG 31714 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 ||||| | || ||||| || |||| Sbjct 31713 CCGTACCCTCTACGGTTTCGGTGGTTA 31687 >seq564 Length=168936 Score = 167 bits (184), Expect = 4e-37 Identities = 189/251 (75%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||| || || || |||||||| ||||| Sbjct 66326 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGTATTACCAAGCCCGCTAT 66268 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || || |||||||| ||||||||| |||| | || |||| ||||||| Sbjct 66267 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAAGAGAC 66208 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| |||||| | ||| || || Sbjct 66207 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGATGCCGTTACCTACACTGA 66148 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 66147 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 66088 Query 16672 CCGTAAGATTT 16682 ||||||| ||| Sbjct 66087 CCGTAAGTTTT 66077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074147632643