Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1041 289 7e-73 >seq1041 Length=363390 Score = 289 bits (320), Expect = 7e-73 Identities = 633/936 (68%), Gaps = 14/936 (1%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||||| ||||| | ||| || ||||| ||| || || || ||| ||| Sbjct 324424 TTCGGATTCAAGACCCTCGAGCGTTCATACCTCCTTCGGATTAACGGCACCGTTGCTGAG 324365 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 ||||| ||||| || | |||||||||||| | || ||||| || ||| |||| Sbjct 324364 CGCCCCCAGCACTTGCTGATGCGTGTTGCTGTCGGCATCCACGGCGAGGACATTGAGAAG 324305 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAACAA 363568 || ||||| ||||| | ||| | || | | ||| ||||| ||||| | || || Sbjct 324304 GCCATTGAGACATACCA-CTTG-ATGTCCCAGAAGTACTTCACCCACGCTTCCCCCACTC 324247 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| |||||| | |||| | || ||| | | |||||||| || | | |||| | Sbjct 324246 TGTTCAATGCCGCTACTCCCCAACCCCAGCTTGCATCTTGCTTCCTGGTTGACATGAGCG 324187 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 || |||||||||||||| ||| || || |||| |||||| | || ||||||| | Sbjct 324186 CTGACAGCATCGAGGGTATCTATGATACTCTCAAGACTTGTGCCATGATCTCCAAGACCG 324127 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || || ||| | ||||| |||| || || | ||||||| | || Sbjct 324126 CCGGTGGTATCGGTCTGAATGTCCACCGCATTCGCGCTACCGGTTC-TTACATTGGTGGA 324068 Query 363748 ACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGG 363807 || || | ||| || || | ||||| ||||| ||||||||| |||| || || | Sbjct 324067 ACCAACGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGC 324008 Query 363808 TACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCAT 363867 || |||||||||||||| |||||| || || |||||||| || || ||||| Sbjct 324007 TATGTCGACCAGGGTGGTAACAAGCGCCCTGGTGCCTTTGCTATCTACCTGGAGCCGTGG 323948 Query 363868 CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGT 363927 || |||||| | || || || || || || ||||| ||| || || ||||| | ||| Sbjct 323947 CACGCCGATGTCTTCGAATTCCTCGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGT 323888 Query 363928 GCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC- 363986 || ||||| || ||||| || || ||| | |||| |||||||||||||| ||||| Sbjct 323887 GCCCGTGACCTTTTCTACGCTCTGTGGACCCCCGACCTCTTTATGAAGCGCGTTGAGGCC 323828 Query 363987 --AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 ||| | ||| ||||||| ||||| |||| ||| || || | ||||| | Sbjct 323827 AACGGT---GACTGGACACTCTTCTGCCCCAACGAGGCTCCCGGCCTGGCTGATGTCTAC 323771 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || || | | ||| || |||| ||||| || ||||| | || ||||| Sbjct 323770 GGCGAGGAGTTCGATGCCCTTTACGCCAAGTACGAGCAAGAGGGCCGTGGCCGCAAGACC 323711 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || ||||| || |||| |||||| | || | |||| ||||| || | ||| Sbjct 323710 ATCAAGGCTCAGAAACTCTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAACCCC 323651 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| | ||||| ||| | |||||| | ||| |||||| || |||| ||||| ||| Sbjct 323650 TTCATGCTCTACAAGGATGCCTGCAACAGGAAGAGTAACCAGAAGAACCTGGGTACTATT 323591 Query 364225 CAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | |||| | ||||| || || ||||| ||||| |||| || || || ||| || || Sbjct 323590 C-GCAGCTCTAACCTGTGCACTGAGATCATTGAGTACAGTGCCCCTGATGAGGTGGCTGT 323532 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 || ||||| || || |||| || || | ||||| Sbjct 323531 TTGCAACCTGGCTTCCCTCGCCCTCCCCACCTTTGT 323496 Score = 96.9 bits (106), Expect = 9e-15 Identities = 243/367 (66%), Gaps = 2/367 (1%) Strand=Plus/Minus Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850 ||||||||||||||| || | || || | || || ||||| || || | || || Sbjct 323018 CAACGAGTGCTTCGAGCCCTACACCTCGAACATCTACTCCCGCCGTGTCCTGGCTGGTGA 322959 Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910 || | ||| || || | || | |||||||| ||| | ||| |||||| || Sbjct 322958 GTTCCAGGTCGTGAACCCTTGGCTCCTGAAGGATCTGGTCGATCTCGGCCTGTGGTCCGA 322899 Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC 364970 || |||||||||| ||||| |||| |||||| || |||||||| || | || Sbjct 322898 CAACATGAAGAACCGCATCATTGCCGACGGTGGTTCCGTCCAGAACATCCCTAACATCCC 322839 Query 364971 AGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCG-AACTCTCATTG 365029 | ||| | ||| | | ||||| ||||| ||||| || ||| ||| ||| || | Sbjct 322838 CGCCGATATCAAGGCCCTGTACAAGACCGTCTGGGAGATCTCCCAGCGCAACATTC-TGC 322780 Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGA 365089 | ||||| ||||| |||||||| | ||| |||| ||||| ||||| | | | | Sbjct 322779 AGATGGCCGCCGACCGCGGTGCCTACATCGATCAGTCGCAGTCCCTTAACATCCACCTTA 322720 Query 365090 CTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTA 365149 |||| || | |||||| || |||||| ||| || ||||| ||||| | Sbjct 322719 AGGAGCCTACTATGGGCAAGCTCACCAGCATGCACTTCGCTGGCTGGAAGATGGGTCTGA 322660 Query 365150 AGACAGG 365156 |||| || Sbjct 322659 AGACCGG 322653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303334379200082