Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1041 147 3e-30 seq2 116 5e-21 >seq1041 Length=363390 Score = 147 bits (162), Expect = 3e-30 Identities = 728/1144 (64%), Gaps = 20/1144 (2%) Strand=Plus/Plus Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 || ||||| || ||||| || ||||||| || | || | || ||||||||||| Sbjct 323517 GAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAC 323576 Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872 || ||| | || || || | || | || |||||||| |||| || |||||| Sbjct 323577 AGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCC 323636 Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932 || || || ||||| || ||||||| || |||| | || | ||| || | ||||| | Sbjct 323637 TTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGA-G 323695 Query 62933 ACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATACA 62987 || ||||||| || | || | | ||||| ||||| | | ||| | Sbjct 323696 TTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCTTGCTCGTACTTGGCGTA---A 323750 Query 62988 ATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATC 63046 | | |||||||| || || | |||| |||| || ||| || | || || | Sbjct 323751 AGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAG 323810 Query 63047 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63105 | | ||| || |||| ||| || || ||||||||||| || || |||| ||||| Sbjct 323811 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCG 323870 Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165 || ||| || || | || | | ||||| || || ||||| ||||||||||| Sbjct 323871 TAGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAA 323929 Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225 | | | ||| | |||||||| |||| ||| || || | | ||||| || ||||| Sbjct 323930 TTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTT 323989 Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285 || ||||| || | || | |||||||| ||| | || | || ||| |||| |||||| Sbjct 323990 ACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 324049 Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATT 63343 ||||| | || ||||| || || || || | || ||||| | ||| Sbjct 324050 GTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 324109 Query 63344 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 63403 ||||| || || || || | || ||||| | || || || | ||||||||| Sbjct 324110 --CAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAG 324167 Query 63404 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63463 || ||||| || || ||| | |||||| || || || || | | ||| | | Sbjct 324168 ATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGG 324227 Query 63464 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGA 63523 ||| | ||||| || | || || |||||||| || || | || | || | | Sbjct 324228 GGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATCAAG 324287 Query 63524 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63583 | ||| |||||||| || || || ||| || || || || || |||||||| Sbjct 324288 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACACGCATC 324347 Query 63584 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63643 | || |||||| || | ||| | | || ||| || | | ||| || || Sbjct 324348 AGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAACGCTCG 324407 Query 63644 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63703 | || || || || || ||||||| ||||| || ||||| | ||| |||||||| Sbjct 324408 AGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATTGCCGAGTTG 324467 Query 63704 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAATAC-TTGAAATAATAGGAAAATG 63762 || | || || || |||| | | ||| || | | |||| || |||||| | | Sbjct 324468 AGCTCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGGAGCAGG 324526 Query 63763 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63822 || || || || || ||||| | | | | ||| || || | ||| | || Sbjct 324527 CTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGAGATGACCATAGAGAATTGCTT 324586 Query 63823 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 63882 |||||||| ||||| || || || ||||| || | || || |||||||| || || || Sbjct 324587 TTTTGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCAGG 324646 Query 63883 ATGT 63886 ||| Sbjct 324647 GTGT 324650 >seq2 Length=351056 Score = 116 bits (128), Expect = 5e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || ||| ||||| || ||| ||||||||||| | | || | |||||||| Sbjct 120422 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 120363 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 120362 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCA 120303 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805 || ||||| || || || || || || ||||||| Sbjct 120302 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 120269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633622883619600