Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq179 114 1e-20
seq875 84.2 2e-11
seq975 82.4 6e-11
>seq179
Length=79788
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | || || ||||| | || ||||| || || | ||
Sbjct 51942 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 52001
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || || || ||||| |||||||| ||||| |||||||||
Sbjct 52002 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 52061
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || ||||| ||| | || ||| ||| || ||||||| ||||||
Sbjct 52062 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 52121
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || |||||||||
Sbjct 52122 ATCCAGAAGGAATCCACC 52139
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || ||||||| || || || | | || ||| | ||| | | ||
Sbjct 51738 ACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCGACAACGTTAAGTCC 51797
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| ||||| ||||| || || |||||||| || ||||||||
Sbjct 51798 AAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTTATTTTCGCCGGCAAG 51857
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||||| ||||| || || | ||||| |||||||| || ||||| ||||| ||||
Sbjct 51858 CAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAAGAGTCCACTCTACAC 51917
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||| | || | || || |||
Sbjct 51918 TTGGTTCTCCGTCTACGTGGTGGT 51941
Score = 93.3 bits (102), Expect = 4e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || ||| ||||||| | ||| | ||||
Sbjct 51455 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAACGTCAAGTCG 51514
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || |||||||||||||| || || || ||||| ||| | || || ||||||||
Sbjct 51515 AAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGCAAG 51574
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | ||||| || || | ||||| |||||||| || || || || || | ||
Sbjct 51575 CAGCTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 51634
Query 22423 TTAGTT 22428
|| |||
Sbjct 51635 TTGGTT 51640
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | ||||| || || |||| || || || || | | |
Sbjct 52170 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 52229
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || || || ||||||||||||||||| || || ||
Sbjct 52230 GACACTATCGACAACGTTAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 52289
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| || || || || ||| | ||||| || || | || || ||||||
Sbjct 52290 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAAC 52349
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||| | || | || ||||| |||| || ||
Sbjct 52350 ATCCAGAAGGAGAGCACCCTGCACCTGGTGTTGCGTCTGCGTGGCGG 52396
>seq875
Length=127222
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
|||||||||||||||||| ||||| ||||| || || || || || || || ||| | ||
Sbjct 82445 AGACAAGGAGGGTATTCCCCCCGACCAACAGCGCCTGATCTTCGCTGGTAAGCAGCTCGA 82386
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
|||| |||||| | || || |||||||| || || || || |||
Sbjct 82385 GGATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACC 82340
>seq975
Length=109893
Score = 82.4 bits (90), Expect = 6e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || | || || || || || | | ||| ||| |
Sbjct 47324 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 47265
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| | |||| || || || ||||||||||| || || || || ||||| || ||
Sbjct 47264 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCCT 47205
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || |||||||| ||| | |||||| ||||||| | ||| |||||||| || ||
Sbjct 47204 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 47145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419722112134315
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |