Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq179 114 1e-20 seq875 84.2 2e-11 seq975 82.4 6e-11 >seq179 Length=79788 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || ||||| | || ||||| || || | || Sbjct 51942 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 52001 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || ||||| |||||||| ||||| ||||||||| Sbjct 52002 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 52061 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | || ||| ||| || ||||||| |||||| Sbjct 52062 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 52121 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || ||||||||| Sbjct 52122 ATCCAGAAGGAATCCACC 52139 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || ||||||| || || || | | || ||| | ||| | | || Sbjct 51738 ACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCGACAACGTTAAGTCC 51797 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| ||||| || || |||||||| || |||||||| Sbjct 51798 AAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTTATTTTCGCCGGCAAG 51857 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||||| ||||| || || | ||||| |||||||| || ||||| ||||| |||| Sbjct 51858 CAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAAGAGTCCACTCTACAC 51917 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| | || | || || ||| Sbjct 51918 TTGGTTCTCCGTCTACGTGGTGGT 51941 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || ||| ||||||| | ||| | |||| Sbjct 51455 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAACGTCAAGTCG 51514 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || ||||| ||| | || || |||||||| Sbjct 51515 AAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGCAAG 51574 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| || || | ||||| |||||||| || || || || || | || Sbjct 51575 CAGCTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 51634 Query 22423 TTAGTT 22428 || ||| Sbjct 51635 TTGGTT 51640 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | ||||| || || |||| || || || || | | | Sbjct 52170 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 52229 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||||||||| || || || Sbjct 52230 GACACTATCGACAACGTTAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 52289 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| || || | || || |||||| Sbjct 52290 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAAC 52349 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||| | || | || ||||| |||| || || Sbjct 52350 ATCCAGAAGGAGAGCACCCTGCACCTGGTGTTGCGTCTGCGTGGCGG 52396 >seq875 Length=127222 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||||||||| ||||| ||||| || || || || || || || ||| | || Sbjct 82445 AGACAAGGAGGGTATTCCCCCCGACCAACAGCGCCTGATCTTCGCTGGTAAGCAGCTCGA 82386 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||| |||||| | || || |||||||| || || || || ||| Sbjct 82385 GGATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACC 82340 >seq975 Length=109893 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 47324 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 47265 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||| || || || || ||||| || || Sbjct 47264 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCCT 47205 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || |||||||| ||| | |||||| ||||||| | ||| |||||||| || || Sbjct 47204 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 47145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419722112134315