Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2 141 2e-28
seq187 107 4e-18
seq242 91.5 3e-13
seq1041 84.2 4e-11
>seq2
Length=351056
Score = 141 bits (156), Expect = 2e-28
Identities = 278/405 (69%), Gaps = 12/405 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||||||||| |||||||||||||||||| || |
Sbjct 120680 TCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATGGACTCCATGAAGTCGAAGGGATTGGCA 120621
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| ||||| | ||| | ||| || || || | | |||||| || || ||||| |
Sbjct 120620 GAGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATG 120561
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | |||||| | ||||||||||||| || | || |||| || ||| | |
Sbjct 120560 TACTGGCACATCAGCTTGGAGTTCATGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAG 120501
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA----CCTGTGCCAGAGA 251798
|| |||| ||| || |||| ||||| | | ||| ||| | | || | | |
Sbjct 120500 AACTCCTGCTCGATGCCAACGGCCTCGACAATGATTTCCTCAACAACCTTGGGATCGGGG 120441
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856
| | | ||| || | ||| |||| || | || || | || ||| |||||||||
Sbjct 120440 C-GGTGGTT---CATGTGAGAGAACAGCAGACAAGCGAAGTCAGT--GTGGAGACCCTCG 120387
Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916
|| ||| ||| | ||||||||| | | || |||||||||| ||||| ||| | |||
Sbjct 120386 TCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGC 120327
Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
|||||||| | || || |||||||| | | ||||||||||
Sbjct 120326 CAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 120282
>seq187
Length=336305
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 279369 TTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGT 279428
||||| || || || |||| ||||||||||| ||| || | ||| | ||||||||
Sbjct 77799 TTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAACCAGACTCACCTGCGCCTCAAGCGT 77858
Query 279429 GGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCC 279488
|| | || || |||||| |||||||||| || | || |||| ||| || ||||| |||
Sbjct 77859 GGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTTCCGGAAAGACCACCCTCATGCGTGCC 77918
Query 279489 ATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCATCTGAGGTAAGGACAGTGTATGTA 279548
||| |||| ||||| || || || || || |||||| | ||| || || ||
Sbjct 77919 ATTAACAACGAGCAGCTTGAGGGCTTCCCCAAGAAGGATGAGGTCAAGACCGTCTACGTC 77978
Query 279549 GAGCACGACATCGACTC 279565
|||||||| |||||||
Sbjct 77979 GAGCACGATCTCGACTC 77995
>seq242
Length=295557
Score = 91.5 bits (100), Expect = 3e-13
Identities = 356/558 (64%), Gaps = 14/558 (3%)
Strand=Plus/Minus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATG----ATGTGGAGCGTTCTAT 218573
||||||||| ||||||||||||| || ||| ||||| || ||||||| ||
Sbjct 158842 GACTTCATCAACAAGGAGCTCATCCTGTTCA----GTATGGCGGATAACCAGCGTTCGAT 158787
Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633
|| ||| |||||||| | |||||| ||||| ||| | || || |||
Sbjct 158786 CCCTTCCGTTGTGGATGGTTTGAAGCCAGGACAGCGCAAGGTGCTTCACACCTGTTTCCG 158727
Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693
|| ||||| | || || ||||| | | || | | ||| ||||||||| ||| |
Sbjct 158726 CCGCAACCTAAAGAAGGACATGAAGGTGGTTGAGCTGGCAGGTCATGTATCCGGAATGAC 158667
Query 218694 TGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTA 218753
| ||||||||||||||| |||||| | || || || | || ||| ||
Sbjct 158666 AGCCTACCATCACGGTGATGTCTCCCTGCAGCAGACTATCGTTGGTCTTGCTCAGACCTT 158607
Query 218754 TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATT 218813
||| ||| |||||||| |||| ||| |||| || | || ||| ||| ||
Sbjct 158606 TGTTGGCTCCAACAACATCAACTGCCTGGAGCCCAGTGGAAATTTCGGTAGTCGACTCCA 158547
Query 218814 GGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCG 218873
||||| ||| |||| ||| | || || | || |||| ||| | | ||
Sbjct 158546 AGGTGGTGGCGATTGTGCCAGTGCTCGTTACATTTACACTCGCCTGTCTCCCTTTGCACG 158487
Query 218874 CCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTC 218933
| |||| ||| | ||||||||| || || | ||| || ||||||||
Sbjct 158486 CAAGGTTTTCCACTCGGCCGATGAACCCCTACTGACGTACAACGAAGACGATGGCAAGAA 158427
Query 218934 GATTGAGCCCGAGTGGTATGTGCCTGCTATTCC---GTTTTTGCTCGTAAATGGTGCCAA 218990
||||||||||||| | | |||||| | || | ||||| || || ||||| |
Sbjct 158426 GATTGAGCCCGAGGTCTTTATGCCTGTCGTCCCGATGATTTTGATC---AACGGTGCGGA 158370
Query 218991 TGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGA 219050
||||||||| || || | ||| || || || |||||||| |||| || | |
Sbjct 158369 TGGTATCGGAACTGGTTGGAGTTCTTCTATCCCCAACTACAATCCTGAGGATGTCGTGAA 158310
Query 219051 CAACGTCAAGCGTCTCAT 219068
||| ||||||| || ||
Sbjct 158309 CAATCTCAAGCGCCTGAT 158292
>seq1041
Length=363390
Score = 84.2 bits (92), Expect = 4e-11
Identities = 266/410 (65%), Gaps = 3/410 (1%)
Strand=Plus/Plus
Query 294094 CCCTCAGACTCATACTTGGTGTAAAGCTCTTCGTATTCCTTGCCATATACATCAGACAGG 294153
||||| ||| ||||||| |||||| | ||| | |||| ||| || ||||||| ||||
Sbjct 323727 CCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGG 323786
Query 294154 CCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTCATG 294213
|| || ||||| ||| | || | ||| | | | | ||| |||||||||||
Sbjct 323787 CCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATA 323846
Query 294214 AATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCT 294273
|| || || | ||||| ||||| || | || ||||| || | ||||| |||
Sbjct 323847 AAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCG 323906
Query 294274 TGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACA 294333
|| || || || ||||| || | || |||| || || ||||| || | |
Sbjct 323907 TGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATA 323966
Query 294334 GCAAAGG-ACC--CCTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAAC 294390
||||||| ||| | || || ||||||| | | ||| | ||| ||| ||||
Sbjct 323967 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAAC 324026
Query 294391 ACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCTCAGCCCCG 294450
|| ||||||||| || || || | ||| || |||||||| | ||| | || |||
Sbjct 324027 ACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCG 324086
Query 294451 CGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGA 294500
|||||||| | | | ||||| || |||||| | ||||||
Sbjct 324087 GTAGCGCGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGA 324136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027821642297991
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |