Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 134 1e-26 seq179 104 2e-17 seq975 96.9 3e-15 >seq2 Length=351056 Score = 134 bits (148), Expect = 1e-26 Identities = 298/448 (67%), Gaps = 27/448 (6%) Strand=Plus/Plus Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461 |||| ||||||||| |||||||| | || || || ||| || || ||||||| | Sbjct 120266 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCATCTTCT 120325 Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521 | || | | ||| | ||||| || || || ||| ||||||| |||| || || | Sbjct 120326 GGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTG 120385 Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAAT 52581 |||| || || ||||| ||||| || || || | | | | | ||| | | Sbjct 120386 ACGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCT---CTCACATGAACCA----- 120437 Query 52582 TGGATTCGGACACGATCCTGAGCATGTTCAAG-----------GAGGCGGTGGCTATCGA 52630 | | | |||||| || |||| | | ||||| || | ||||| Sbjct 120438 ------CCGCCCCGATCCCAAGGTTGTTGAGGAAATCATTGTCGAGGCCGTTGGCATCGA 120491 Query 52631 AAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCAT 52690 ||||||| || || | ||| || || || ||||| ||||||||| | || || Sbjct 120492 GCAGGAGTTCTTGACTGACGCTCTTCCCTGCGCTCTGCTTGGCATGAACTCCAAGCTGAT 120551 Query 52691 GTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGT 52749 |||| ||||||| ||||| || || || || ||| ||||| ||||| || | | |||| Sbjct 120552 GTGCCAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGG-CAACAAGAAGT 120610 Query 52750 ACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCA 52809 ||| |||| || |||||| || || || ||| | ||| || || | |||||||||| Sbjct 120611 ACTACAACTCTGCCAATCCCTTCGACTTCATGGAGTCCATCTCTCTGGCCGGCAAGACCA 120670 Query 52810 ACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||| ||||||||||| ||||| || || Sbjct 120671 ACTTCTTCGAGAAGCGTGTCGGTGACTA 120698 >seq179 Length=79788 Score = 104 bits (114), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| |||||| || | || | | | |||||| || ||||||||||| Sbjct 52397 GCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 52338 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| |||||| || || ||||| | |||| |||||||| ||||| || || Sbjct 52337 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGG 52278 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| || | || | |||| ||| || | ||||| | ||| Sbjct 52277 AATACCCTCCTTGTC-CTGGATCTTGCTCTTAACGTTG-TCGATAGTGTCTGAGCTCTCG 52220 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | ||| | || || || |||||||| || ||||| |||||||| Sbjct 52219 ACCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 52170 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | || | ||| || || | | |||||||| || |||||||||||| Sbjct 51658 GCCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 51599 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || |||||| |||||| || || || |||| |||| | |||||||||||| ||||| Sbjct 51598 CAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGG 51539 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || || | | || | ||| ||| | ||||| || Sbjct 51538 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAAC 51479 Query 138567 CTCGACCGTCAGCGTTTTACCAGT 138590 ||| | || | || || ||||| Sbjct 51478 CTCAAGGGTGATGGTCTTGCCAGT 51455 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || |||| | ||||| || || |||||||||||| | Sbjct 51940 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 51881 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||| | || || |||| | || |||||||| ||||| || || Sbjct 51880 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 51821 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || | |||| ||| || | |||||| | ||||| | Sbjct 51820 ATGCCCTCCTTGTC-CTGAATCTTGGACTTAACGTTG-TCGATGGTGTCAGATGACTCAA 51763 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||||| || | || || || ||||| || || || Sbjct 51762 CCTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGAC 51726 >seq975 Length=109893 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 47143 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 47202 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||||||||| || || || || || ||||| || | || || || | ||| Sbjct 47203 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 47261 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 47262 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 47320 Query 138603 AAAA 138606 ||| Sbjct 47321 GAAA 47324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496255260024720