Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq179 141 1e-28
seq975 136 4e-27
seq875 93.3 5e-14
>seq179
Length=79788
Score = 141 bits (156), Expect = 1e-28
Identities = 177/239 (74%), Gaps = 8/239 (3%)
Strand=Plus/Minus
Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418
|||| | ||| || | | |||||||||||| |||| || |||||||| ||||| ||||
Sbjct 52404 ATTACTGGCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGT 52345
Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478
|||| || ||||| || |||| || |||||||| || ||||| || | ||||||||||
Sbjct 52344 AGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGT 52285
Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---G 46534
| | || | | |||||||||| |||||| |||| | ||| | | | ||||| |
Sbjct 52284 CAGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTT-AACGTTGTCGATAGTGTCTGAG 52226
Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || || | |||||| || || || ||||| || || |||||||| |||||
Sbjct 52225 CTC---TCGACCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 52170
Score = 127 bits (140), Expect = 2e-24
Identities = 131/169 (78%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| ||||| || |||| || |||||||||||||||||
Sbjct 51622 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAA 51563
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| ||||| ||||| | || | | |||||||||| ||||||| ||||| |||
Sbjct 51562 GATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 51504
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | || ||||| || || || || | |||||||| ||||| ||
Sbjct 51503 TGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 51455
Score = 98.7 bits (108), Expect = 1e-15
Identities = 132/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||| || ||||| ||||||||||| ||||| || |||| || | |||||||||||||||
Sbjct 51905 CTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAA 51846
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||||| || | || |||||||||| ||||| ||| | |||
Sbjct 51845 AATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTT-AACGT 51787
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||| || || || || | ||||| || || || ||||| || || |
Sbjct 51786 TGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGA 51727
Query 46581 C 46581
|
Sbjct 51726 C 51726
Score = 93.3 bits (102), Expect = 5e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||||| || || || | || || ||||||||||| |||||
Sbjct 52132 TCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAG 52073
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | ||||| || |||| || | || |||||| || |||||| ||| | |
Sbjct 52072 ATGAGACGCTGTTGATCGGGAGGAATGCCCTCCTTATCTTGGATCTTGGACTTCACATTA 52013
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | |||||| || || || || | || || |||||||| || ||||| || ||
Sbjct 52012 TCGATAGTGTCGGATGACTCGACCTCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACG 51953
Query 46583 AAGATTTGCAT 46593
|| || |||||
Sbjct 51952 AAAATCTGCAT 51942
>seq975
Length=109893
Score = 136 bits (150), Expect = 4e-27
Identities = 141/182 (77%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| || ||||| | || |||||||||||||||||||| |
Sbjct 47143 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 47202
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||| ||||| | || | || |||||||||| |||||| |||||| ||| |
Sbjct 47203 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 47261
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||||||| || ||||| | || ||||| || |||||||| || || ||
Sbjct 47262 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 47321
Query 46583 AA 46584
||
Sbjct 47322 AA 47323
>seq875
Length=127222
Score = 93.3 bits (102), Expect = 5e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || |||||||| | || ||||||||||| || |||||
Sbjct 82346 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAA 82405
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| |||||| ||||||| || | | |||||||||
Sbjct 82406 GATCAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTC 82444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565230267632520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |