Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1041 257 2e-63 seq182 96.9 4e-15 seq2 89.7 6e-13 >seq1041 Length=363390 Score = 257 bits (284), Expect = 2e-63 Identities = 580/865 (67%), Gaps = 19/865 (2%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || ||||||| || |||| |||||||||||| |||||| | ||||||| | Sbjct 323505 GGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATG 323564 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || |||| ||| || || ||| || |||| ||||| ||||||||||| || Sbjct 323565 ATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTG 323624 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| |||||||||||||||||| |||| | || ||||| ||||| | || |||||| Sbjct 323625 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATG 323684 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 106692 || | ||| | || | | || | |||| || |||| || ||||| |||||| Sbjct 323685 GCATACCAGAGTTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCTCTTGCTCGTA 323740 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 ||| | ||| ||||| || |||||||| || | || | || || || |||| || Sbjct 323741 CTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTT 323800 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || ||||| || | ||| | ||| ||||||| |||||||| || ||||| || | Sbjct 323801 GGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGT 323860 Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 |||||| | | || || || | ||| |||| || | ||| ||||| || | Sbjct 323861 CCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAG 323920 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 106926 || ||||| || | || ||| |||||||| ||||| || |||| || | || Sbjct 323921 ATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGG 323980 Query 106927 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986 | ||| | ||| | || | |||||||| || ||| |||||| || || ||||| Sbjct 323981 GCGCTTGTTA---CCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCAT 324037 Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 107046 |||| |||||| | || || || || || | ||| ||| | || | | Sbjct 324038 AGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAAT 324097 Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 |||| | || || ||||| || || ||| ||||| ||||| | | || Sbjct 324098 GCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAG 324157 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 ||| |||||||||| | ||| ||| | | || | | ||||||||| | | Sbjct 324158 AGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAG 324217 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 107225 ||| ||| || ||| | |||||||| || || || | ||||| |||| ||| | | Sbjct 324218 CTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAA-GTACTTCT 324276 Query 107226 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGG 107285 |||||||| || ||||||||| | | | |||||||| || ||||||||||||| | Sbjct 324277 GGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAG 324336 Query 107286 CCACACGCATAAACATGTATTGGGG 107310 | |||||||| | || || ||||| Sbjct 324337 CAACACGCATCAGCAAGTGCTGGGG 324361 >seq182 Length=78703 Score = 96.9 bits (106), Expect = 4e-15 Identities = 222/326 (68%), Gaps = 14/326 (4%) Strand=Plus/Minus Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 9422 ||||| | || ||||||||||||||||||| || || || || | ||||| | Sbjct 14401 TTTCCAATAGCGTCAATCTCATCAATGAAGATGATGCAGGGGGTGTTCTTTCGGGCATTG 14342 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG-- 9480 | ||||||||||| || | || || ||||| |||||||| || || || | | Sbjct 14341 GCGAAGAGATCGCGGACACGAGAGGGACCGACACCGACAAACATTTCAACGAATTCGGAA 14282 Query 9481 CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9540 | | | ||| || | ||| || || ||||||||| ||| |||| || || | | Sbjct 14281 CCACTG-ACACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGCAATG 14224 Query 9541 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC--ACT 9598 ||||||| ||||| || ||| | ||||| |||||| || |||||||| || || ||| Sbjct 14223 TCTTACCAGTACCGGGAGGACCTGAGAGGATGGCACCACGGGGAATCTTTGCACCCAACT 14164 Query 9599 TCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCA--AT-TCATCTTT 9655 || | | | ||| ||||||| ||| || || | ||||| || ||| | || Sbjct 14163 TC--TCGAACCGCTCGGGTTGCTGGAGGAAGCTAACGA---ATTCCATGATCTCAACCTT 14109 Query 9656 GGCGGCGTCAATCCCCTCAACATCGG 9681 ||| |||| || ||| |||| |||| Sbjct 14108 GGCCTCGTCCATGCCCGCAACGTCGG 14083 >seq2 Length=351056 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || || || || || || || ||||| || || ||||| || || Sbjct 120399 GTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCC 120340 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||||| ||| | || | |||||| || ||||||||||||||||| ||| Sbjct 120339 ACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 120280 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 || || |||| || ||| ||||||| Sbjct 120279 GGCGAAGGCAACCAGACGCGAAGCGAAGG 120251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589972311651240