Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1108 91.5 1e-12 >seq1108 Length=96137 Score = 91.5 bits (100), Expect = 1e-12 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 550053 TTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112 ||||||| |||||||| || || |||||| | || || || || | || |||||| | Sbjct 49642 TTGAAATCATTGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCACCG 49583 Query 550113 AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172 | || || | | | | |||||||| || || | |||| | | || || ||| | Sbjct 49582 ACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACAACA 49523 Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAG 550232 || | || ||||| || ||| | ||||| | ||||||| || | |||||||| | Sbjct 49522 CTGTCTTCGATGCCAAGCGTCTCATTGGTCGCCGTTTTAACGACGCTGAGGTTCAGGCCG 49463 Query 550233 ATATGAAGCATTGGCCTTTC 550252 |||||||||| ||||||||| Sbjct 49462 ATATGAAGCACTGGCCTTTC 49443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029235129928990