Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1041 156 1e-32 seq236 138 3e-27 seq208 87.8 5e-12 >seq1041 Length=363390 Score = 156 bits (172), Expect = 1e-32 Identities = 558/872 (64%), Gaps = 3/872 (0%) Strand=Plus/Plus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || | |||||| |||||||||||| || || || || | ||||||||| Sbjct 323553 CTGTACTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGG 323612 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 ||| || ||||| || ||||||||||| || ||| | ||| | || ||||| |||| Sbjct 323613 TTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGG 323672 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807 || || ||||| |||||| | | || || || |||| | | ||| || Sbjct 323673 GCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCT 323732 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || || || || | | | ||||| ||||| |||| ||| || || Sbjct 323733 TGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGA 323792 Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACA 155927 || | |||||| || || | ||| || | || |||| |||||| | Sbjct 323793 GCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGG 323852 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTC 155987 || | ||| | ||| ||||||||||| | || |||||| | ||||| ||| Sbjct 323853 TCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTC 323912 Query 155988 TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA 156047 ||||| || || | |||||| | ||| | || |||||||| || |||||||| Sbjct 323913 TTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAG 323972 Query 156048 CTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCT 156104 |||| | |||| |||||||| || ||||| || || || || || || |||| Sbjct 323973 GCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGC 324032 Query 156105 AGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAG 156164 |||||||||| |||||| ||||| | ||| |||||||| | ||| | ||||| | | | Sbjct 324033 AGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCG 324092 Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224 |||| || | || || || |||||||| | || || || || || | Sbjct 324093 CGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTC 324152 Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284 || | ||||| | ||||| || || ||| | ||| | || |||| || Sbjct 324153 TTGAGAGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGAT 324212 Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344 | || ||| | || || | || ||||| || || || | || || | || ||| Sbjct 324213 GCAAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTAC 324272 Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAG 156404 || | ||||| | | ||||||||| | |||||||| | ||||| || | | Sbjct 324273 TTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCG 324332 Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGA 156464 | || || | |||| || ||||| || ||||| ||| || | ||| || || Sbjct 324333 ACAGCAACACGCATCAGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGG 324392 Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 ||||||| || || || || || || ||||| Sbjct 324393 AGGTATGAACGCTCGAGGGTCTTGAATCCGAA 324424 >seq236 Length=49381 Score = 138 bits (152), Expect = 3e-27 Identities = 180/249 (72%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 |||||| || ||||||||| | || || ||||| |||||||| ||||| ||||||| Sbjct 8333 ACGCTGGATGTAACCAGTTTCGGCAGTCTTGACAGCAGTATCAATCAGACCCTCACGACC 8274 Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAAC 302714 | |||| || |||||||| | ||| || | || | || | ||| ||||||| Sbjct 8273 AGCCATGGCGTGGAAGAAGAACTCAGTAGGAGTCAAGCCACGAAGGTATGAGTTCTCAAC 8214 Query 302715 GAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTC 302774 ||| ||||| | |||||| || | ||| |||||| ||||| || ||||| | | || Sbjct 8213 GAATCCACGGGACTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGAAGGGTACGATACTT 8154 Query 302775 ATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTG 302834 ||||| | || |||||||| || || ||| ||| ||||||| || | ||||||| Sbjct 8153 GAAGCCGAACGGAATACGCTTGCCTTCCACGGACTGTTGTCCCACAAGCGCAGTCATCTG 8094 Query 302835 CGAAATATT 302843 ||||||||| Sbjct 8093 CGAAATATT 8085 Score = 107 bits (118), Expect = 6e-18 Identities = 108/140 (77%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| ||||||||| Sbjct 9130 AGAATTTCCTTCAGACGTGGCACACCAAGCGTGACGTT---CTTGGACGACACACCAGCA 9074 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||||||| ||||| || | |||||| | |||||||||||| || ||||||| Sbjct 9073 AAGTGGAAAGTGTTCAGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGGGCCGCAAGA 9014 Query 301933 ATACCAACCATTTCTCCTGG 301952 | || |||||||| || || Sbjct 9013 ACGCCGACCATTTCACCAGG 8994 >seq208 Length=64732 Score = 87.8 bits (96), Expect = 5e-12 Identities = 127/179 (71%), Gaps = 8/179 (4%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || ||||| | ||||||||||| |||||||| || |||||||| |||||||| || || Sbjct 32413 GCGCCGTGGGCGATCATACAATCGCGCTCCATCTCTCCGAAACGGAGACCACCGTCACGG 32354 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600 || | |||||| ||||||| || || || | ||||||| | ||||| Sbjct 32353 GCACGACCCTCCACAGGCTGGCGGGTAAGGATCTGAGTAGGACCACGAGCACGAGCG--- 32297 Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 || ||| |||| ||||| || |||||||||||| | | |||||| | ||||| Sbjct 32296 -TGGATCTTGTCATCCACCATGTGGCGCAGACGCTGGTAGTAGGTGGGACCCAGGAAGA 32239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471795894829887