Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 152 6e-31
seq2 134 2e-25
seq431 113 6e-19
seq1097 111 2e-18
seq324 102 1e-15
>seq1041
Length=363390
Score = 152 bits (168), Expect = 6e-31
Identities = 333/500 (67%), Gaps = 12/500 (2%)
Strand=Plus/Plus
Query 1628099 CGACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTC--CGTGGGCGA 1628156
||||||| |||| ||||| | | | ||||||||| ||||| || | ||||
Sbjct 323494 CGACAAAGGTGGGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCAC 323553
Query 1628157 CGAAAACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCT 1628215
| | || | |||||| ||||||||||| | | || | ||||||||||||| ||
Sbjct 323554 TGTA--CTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAA-TAGTACCCAGGTTCTTCT 323610
Query 1628216 GGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCT 1628275
|||| | || |||| ||| ||||||| ||||||| |||| || |||||| |||
Sbjct 323611 GGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCT 323670
Query 1628276 GCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGC 1628332
| ||| ||| ||||| |||||| | | || | || ||| ||| | ||||
Sbjct 323671 GGGCCTCGAGAATGGCATACCAGAGTTTCTGAGC---CTTGATGGTCTTGCGGCCACGGC 323727
Query 1628333 CCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGC 1628392
||| || || || |||||||| || |||||
Sbjct 323728 CCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGC 323787
Query 1628393 CGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAA 1628452
|||| |||||| || || ||||| | |||||| || || | | |||| |||||
Sbjct 323788 CGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAA 323847
Query 1628453 AGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGT 1628512
||||||| |||||||| ||||| || ||||| || || || ||||||||| ||||
Sbjct 323848 AGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGT 323907
Query 1628513 GGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGG 1628572
||||||| || ||||| | |||| | |||||||||||||||||||||||| |
Sbjct 323908 GGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAG 323967
Query 1628573 CAAAGGCGCCCTTGCGCTTG 1628592
||||||| || |||||||
Sbjct 323968 CAAAGGCACCAGGGCGCTTG 323987
>seq2
Length=351056
Score = 134 bits (148), Expect = 2e-25
Identities = 175/242 (72%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 120707 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATG 120648
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| || |||| | ||||||| ||| | | ||||| | | |
Sbjct 120647 GACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 120588
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||||||||| ||||| ||||| |||||||||||||| || || ||||||||| |
Sbjct 120587 AGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTTCATGCCAAGC 120528
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || | || ||| ||||| | |||||| | ||||||||||| |||
Sbjct 120527 AGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGGCCTCGACAATG 120468
Query 868931 AT 868932
||
Sbjct 120467 AT 120466
Score = 113 bits (124), Expect = 6e-19
Identities = 179/252 (71%), Gaps = 5/252 (2%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || |||||||||||||| ||| | |||| | || |||
Sbjct 120055 GAGTGGATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGACCTGG 119996
Query 869693 ACCTCCTTCA-TGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751
||||| | || |||| || | | ||||||||| || || |||||| ||| |||||
Sbjct 119995 ACCTC-TGCACTGAAACGCTCAACGAGGTTCTCGTTGACAATACCGTCGGAGGCCGCGAA 119937
Query 869752 AAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTG 869808
|| ||||||||||| ||| |||| ||||| |||||| | | ||| |||||
Sbjct 119936 GAAGGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTC 119877
Query 869809 GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868
| || | ||| || | |||||| |||||||||| ||||| |||||||| ||
Sbjct 119876 GTGAAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAATGAGGCTTCGGCCTTCTT 119817
Query 869869 GTACATCTCCCA 869880
|||||| | |||
Sbjct 119816 GTACATTTGCCA 119805
>seq431
Length=216776
Score = 113 bits (124), Expect = 6e-19
Identities = 120/157 (76%), Gaps = 1/157 (1%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| || || || || ||||| ||||||||||| | || || ||||||
Sbjct 11768 GACAGCATCGGTGGAACTGTAACATGCGTAATCCGCAACGTGCCAGTCGGACTGGGCGAG 11709
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|||||||| || ||| | || ||| ||||| |||||| ||||| ||||| || |||
Sbjct 11708 CCGTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 11649
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
||||| |||||||| ||| ||| || |||| ||||
Sbjct 11648 AAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 11612
Score = 91.5 bits (100), Expect = 2e-12
Identities = 213/319 (67%), Gaps = 8/319 (3%)
Strand=Plus/Minus
Query 18099 TGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCC 18158
||||||||| ||| | ||||||||||||| |||| || || ||| || |
Sbjct 12452 TGGCGAGTCCCACTGTCGCTCCGTCGGCTGCATCGTCGATGGATGTCCTCCGGGCCTAGA 12393
Query 18159 ACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACT 18218
| | | ||||||||||| ||||| || || |||||||| || ||||| |||| ||
Sbjct 12392 AATCACTGAGGCCGACATTCAGCCCCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCT 12333
Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278
| || ||||| ||||| || || ||| |||||||| ||||| ||| |||| |
Sbjct 12332 CACTACCCCGCGGGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCGT 12273
Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338
||| || ||| | || | | | | | || ||| |||||||| ||| |||||
Sbjct 12272 CACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGTCCCAAGGACTA 12213
Query 18339 TTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTACATGG 18391
| || | ||| || || | ||||| || ||||| | ||||||| |||
Sbjct 12212 CGGTGGCA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGATTTCACCTACCTGG 12154
Query 18392 CCAAGTACGGCATCAAGGC 18410
||||||||| |||||||
Sbjct 12153 AGAAGTACGGCGTCAAGGC 12135
>seq1097
Length=96321
Score = 111 bits (122), Expect = 2e-18
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| ||||||||| | || |||||| | || || || | || |||||| | || || |||
Sbjct 12805 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCTAAC 12864
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||||||||| || |||||||||||||||||||| |||||| ||
Sbjct 12865 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 12915
>seq324
Length=24012
Score = 102 bits (112), Expect = 1e-15
Identities = 89/111 (80%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||||||| | || |||||| ||||| || | || |||||| | || ||||||
Sbjct 3039 GCCGCCAACTACTTGGATATCAAGGGACTGCTTGACGTCGGCTGCAAGACAGTTGCCAAC 2980
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||| ||||| | ||||||||||||| ||| || |||||| ||
Sbjct 2979 ATGATCAAGGGAAAGTCCACAGAGGAGATCCGCAGGACTTTCAACATCCAG 2929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107044743549867
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |