Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1041 152 6e-31 seq2 134 2e-25 seq431 113 6e-19 seq1097 111 2e-18 seq324 102 1e-15 >seq1041 Length=363390 Score = 152 bits (168), Expect = 6e-31 Identities = 333/500 (67%), Gaps = 12/500 (2%) Strand=Plus/Plus Query 1628099 CGACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTC--CGTGGGCGA 1628156 ||||||| |||| ||||| | | | ||||||||| ||||| || | |||| Sbjct 323494 CGACAAAGGTGGGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCAC 323553 Query 1628157 CGAAAACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCT 1628215 | | || | |||||| ||||||||||| | | || | ||||||||||||| || Sbjct 323554 TGTA--CTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAA-TAGTACCCAGGTTCTTCT 323610 Query 1628216 GGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCT 1628275 |||| | || |||| ||| ||||||| ||||||| |||| || |||||| ||| Sbjct 323611 GGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCT 323670 Query 1628276 GCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGC 1628332 | ||| ||| ||||| |||||| | | || | || ||| ||| | |||| Sbjct 323671 GGGCCTCGAGAATGGCATACCAGAGTTTCTGAGC---CTTGATGGTCTTGCGGCCACGGC 323727 Query 1628333 CCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGC 1628392 ||| || || || |||||||| || ||||| Sbjct 323728 CCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGC 323787 Query 1628393 CGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAA 1628452 |||| |||||| || || ||||| | |||||| || || | | |||| ||||| Sbjct 323788 CGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAA 323847 Query 1628453 AGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGT 1628512 ||||||| |||||||| ||||| || ||||| || || || ||||||||| |||| Sbjct 323848 AGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGT 323907 Query 1628513 GGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGG 1628572 ||||||| || ||||| | |||| | |||||||||||||||||||||||| | Sbjct 323908 GGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAG 323967 Query 1628573 CAAAGGCGCCCTTGCGCTTG 1628592 ||||||| || ||||||| Sbjct 323968 CAAAGGCACCAGGGCGCTTG 323987 >seq2 Length=351056 Score = 134 bits (148), Expect = 2e-25 Identities = 175/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 120707 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATG 120648 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| || |||| | ||||||| ||| | | ||||| | | | Sbjct 120647 GACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 120588 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||| |||||||||||||| || || ||||||||| | Sbjct 120587 AGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTTCATGCCAAGC 120528 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | || ||| ||||| | |||||| | ||||||||||| ||| Sbjct 120527 AGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGGCCTCGACAATG 120468 Query 868931 AT 868932 || Sbjct 120467 AT 120466 Score = 113 bits (124), Expect = 6e-19 Identities = 179/252 (71%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || |||||||||||||| ||| | |||| | || ||| Sbjct 120055 GAGTGGATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGACCTGG 119996 Query 869693 ACCTCCTTCA-TGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751 ||||| | || |||| || | | ||||||||| || || |||||| ||| ||||| Sbjct 119995 ACCTC-TGCACTGAAACGCTCAACGAGGTTCTCGTTGACAATACCGTCGGAGGCCGCGAA 119937 Query 869752 AAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTG 869808 || ||||||||||| ||| |||| ||||| |||||| | | ||| ||||| Sbjct 119936 GAAGGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTC 119877 Query 869809 GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 | || | ||| || | |||||| |||||||||| ||||| |||||||| || Sbjct 119876 GTGAAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAATGAGGCTTCGGCCTTCTT 119817 Query 869869 GTACATCTCCCA 869880 |||||| | ||| Sbjct 119816 GTACATTTGCCA 119805 >seq431 Length=216776 Score = 113 bits (124), Expect = 6e-19 Identities = 120/157 (76%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || ||||| ||||||||||| | || || |||||| Sbjct 11768 GACAGCATCGGTGGAACTGTAACATGCGTAATCCGCAACGTGCCAGTCGGACTGGGCGAG 11709 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 |||||||| || ||| | || ||| ||||| |||||| ||||| ||||| || ||| Sbjct 11708 CCGTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 11649 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 11648 AAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 11612 Score = 91.5 bits (100), Expect = 2e-12 Identities = 213/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 18099 TGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCC 18158 ||||||||| ||| | ||||||||||||| |||| || || ||| || | Sbjct 12452 TGGCGAGTCCCACTGTCGCTCCGTCGGCTGCATCGTCGATGGATGTCCTCCGGGCCTAGA 12393 Query 18159 ACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACT 18218 | | | ||||||||||| ||||| || || |||||||| || ||||| |||| || Sbjct 12392 AATCACTGAGGCCGACATTCAGCCCCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCT 12333 Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278 | || ||||| ||||| || || ||| |||||||| ||||| ||| |||| | Sbjct 12332 CACTACCCCGCGGGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCGT 12273 Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338 ||| || ||| | || | | | | | || ||| |||||||| ||| ||||| Sbjct 12272 CACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGTCCCAAGGACTA 12213 Query 18339 TTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTACATGG 18391 | || | ||| || || | ||||| || ||||| | ||||||| ||| Sbjct 12212 CGGTGGCA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGATTTCACCTACCTGG 12154 Query 18392 CCAAGTACGGCATCAAGGC 18410 ||||||||| ||||||| Sbjct 12153 AGAAGTACGGCGTCAAGGC 12135 >seq1097 Length=96321 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | || |||||| | || || || | || |||||| | || || ||| Sbjct 12805 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCTAAC 12864 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || |||||||||||||||||||| |||||| || Sbjct 12865 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 12915 >seq324 Length=24012 Score = 102 bits (112), Expect = 1e-15 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||| | || |||||| ||||| || | || |||||| | || |||||| Sbjct 3039 GCCGCCAACTACTTGGATATCAAGGGACTGCTTGACGTCGGCTGCAAGACAGTTGCCAAC 2980 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||||| | ||||||||||||| ||| || |||||| || Sbjct 2979 ATGATCAAGGGAAAGTCCACAGAGGAGATCCGCAGGACTTTCAACATCCAG 2929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107044743549867