Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq179 107 2e-18 >seq179 Length=79788 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || ||||| || || ||||||||||| || || || || | || Sbjct 51942 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 52001 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || || || || |||||||||||| Sbjct 52002 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 52061 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| || ||| | | | || || || ||| Sbjct 52062 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 52121 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || |||||||| || || ||| Sbjct 52122 ATCCAGAAGGAATCCACCCTCCAC 52145 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || ||||| ||||| || || || | | Sbjct 52170 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 52229 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | |||||||| ||||| || || || || || || || Sbjct 52230 GACACTATCGACAACGTTAAGA-GCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCA 52288 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || || ||||||||||| | | | || || || || Sbjct 52289 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAA 52348 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || ||| |||||||||| |||| || ||| Sbjct 52349 CATCCAGAAGGAGAGCACCCTGCACCTGGTGTTGCGTCTGCGTGGCGGC 52397 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || ||||| || ||||| ||||||||||| ||||| || Sbjct 51515 AAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGCAAG 51574 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||||||||| | | |||| || || ||||| || ||||| || || || ||| Sbjct 51575 CAGCTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 51634 Query 24908 TTGGT 24912 ||||| Sbjct 51635 TTGGT 51639 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777 || || || ||||| || ||||| || ||||| || || | | ||||| | || ||| Sbjct 51729 AAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCGACAAC 51788 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 | ||| | || ||| || ||||| || || || || ||||| || || ||| | || || Sbjct 51789 GTTAAGTCCAA-GATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTTATTTT 51847 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 ||||| || ||| ||||||| | | |||| || || ||||| || || || || Sbjct 51848 CGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAAGAGTC 51907 Query 24898 GACACTACACTTGGT 24912 || ||||||||||| Sbjct 51908 CACTCTACACTTGGT 51922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449891127098280