Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1041 154 2e-31 seq2 136 6e-26 seq1097 114 2e-19 seq1008 114 2e-19 seq324 87.8 3e-11 >seq1041 Length=363390 Score = 154 bits (170), Expect = 2e-31 Identities = 270/396 (68%), Gaps = 6/396 (2%) Strand=Plus/Plus Query 2071612 GTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGC 2071671 || |||||||||| |||||| || || |||| ||| ||||||| |||||| |||| Sbjct 323595 GTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGG 323654 Query 2071672 GCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAG 2071731 ||| |||||| |||| ||| || ||||| |||| | || | || | | Sbjct 323655 TTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGAT---G 323711 Query 2071732 GTCCT-CG--CGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCG 2071788 ||| | || | ||||||| | ||||| || || | ||||| Sbjct 323712 GTCTTGCGGCCACGGCCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCG 323771 Query 2071789 TGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTC 2071848 | | || ||||||||| |||||| ||||| ||||| | |||||| ||| | | Sbjct 323772 TAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCC 323831 Query 2071849 ACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGG 2071908 | ||||| |||||| |||||| |||||||| |||| || || || || || || Sbjct 323832 TCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGA 323891 Query 2071909 TTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCAC 2071968 ||||||||| ||||||||||| ||| ||||| | |||| || |||||||||||| Sbjct 323892 ACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCAC 323951 Query 2071969 GGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTG 2072004 |||||||||||| |||||||| || ||||||| Sbjct 323952 GGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTG 323987 Score = 109 bits (120), Expect = 9e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||||||||| || |||| |||||| || || ||||| || |||| |||||||| Sbjct 323996 CTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGA 324055 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||| || | | ||| | || | ||||| | ||| | | || Sbjct 324056 GGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATTCAGACC 324115 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || ||||| | ||||||||| | || || | || || || || ||||| ||||| Sbjct 324116 GATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAGATACCCTC 324175 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||| || ||||||| | ||| ||||| || | || || | | || | Sbjct 324176 GATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGGGGAGTAGC 324235 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||| || ||||| Sbjct 324236 GGCATTGAACAGAGTGGG 324253 >seq2 Length=351056 Score = 136 bits (150), Expect = 6e-26 Identities = 180/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 120715 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCA 120656 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| || ||||| | ||||| ||||| | |||| Sbjct 120655 GAGAGATGGACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCCGA 120596 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| |||||||| ||||||||||||||||| || || ||||| Sbjct 120595 GGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTTCA 120536 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || || ||| || | || | | ||||| | |||||| | ||||||| Sbjct 120535 TGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGGCCT 120476 Query 794131 CGATGATGAT 794140 ||| ||||| Sbjct 120475 CGACAATGAT 120466 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| |||||||||||||| || ||||||||||| ||||||||||| || || Sbjct 120097 GGCTCCTTGATATAGGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATC 120038 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 ||||||||||| || ||||| Sbjct 120037 ATTATCTGGAAGCCGTAGAAGCA 120015 >seq1097 Length=96321 Score = 114 bits (126), Expect = 2e-19 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||| | || |||||| ||||||| || | || ||||||||||| || ||| Sbjct 12805 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCTAAC 12864 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| || ||||| |||||||||||||| |||||| || Sbjct 12865 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 12915 >seq1008 Length=106440 Score = 114 bits (126), Expect = 2e-19 Identities = 134/177 (76%), Gaps = 3/177 (2%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||| ||||| |||||||||||| ||||||| || ||| | | Sbjct 97301 GTACTTGGTCACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGGAG 97242 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||||||| || | |||||||||||| |||| | ||| || |||||| || || Sbjct 97241 GATCAGGCGGACCGAGGTCTGGATCTCCCGGGAGGAGATGGTAGACTTCTTGTT-GTACG 97183 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646 | ||||| | |||||| || ||| || |||| ||||| | ||| ||||||| Sbjct 97182 CAGCCAGCTTGGAGGCCTCCGTAGCGACACGCTCGAAAATGTC-TGGACGAACGAGT 97127 >seq324 Length=24012 Score = 87.8 bits (96), Expect = 3e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||| | || |||||| || || || | || |||||||| || |||||| Sbjct 3039 GCCGCCAACTACTTGGATATCAAGGGACTGCTTGACGTCGGCTGCAAGACAGTTGCCAAC 2980 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||| ||||| | ||||| ||||||| ||| || |||||| || Sbjct 2979 ATGATCAAGGGAAAGTCCACAGAGGAGATCCGCAGGACTTTCAACATCCAG 2929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916123962880289