Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 154 2e-31
seq2 136 6e-26
seq1097 114 2e-19
seq1008 114 2e-19
seq324 87.8 3e-11
>seq1041
Length=363390
Score = 154 bits (170), Expect = 2e-31
Identities = 270/396 (68%), Gaps = 6/396 (2%)
Strand=Plus/Plus
Query 2071612 GTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGC 2071671
|| |||||||||| |||||| || || |||| ||| ||||||| |||||| ||||
Sbjct 323595 GTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGG 323654
Query 2071672 GCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAG 2071731
||| |||||| |||| ||| || ||||| |||| | || | || | |
Sbjct 323655 TTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGAT---G 323711
Query 2071732 GTCCT-CG--CGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCG 2071788
||| | || | ||||||| | ||||| || || | |||||
Sbjct 323712 GTCTTGCGGCCACGGCCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCG 323771
Query 2071789 TGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTC 2071848
| | || ||||||||| |||||| ||||| ||||| | |||||| ||| | |
Sbjct 323772 TAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCC 323831
Query 2071849 ACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGG 2071908
| ||||| |||||| |||||| |||||||| |||| || || || || || ||
Sbjct 323832 TCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGA 323891
Query 2071909 TTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCAC 2071968
||||||||| ||||||||||| ||| ||||| | |||| || ||||||||||||
Sbjct 323892 ACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCAC 323951
Query 2071969 GGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTG 2072004
|||||||||||| |||||||| || |||||||
Sbjct 323952 GGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTG 323987
Score = 109 bits (120), Expect = 9e-18
Identities = 179/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||||||||| || |||| |||||| || || ||||| || |||| ||||||||
Sbjct 323996 CTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGA 324055
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||||||| || | | ||| | || | ||||| | ||| | | ||
Sbjct 324056 GGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATTCAGACC 324115
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || ||||| | ||||||||| | || || | || || || || ||||| |||||
Sbjct 324116 GATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAGATACCCTC 324175
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||| || ||||||| | ||| ||||| || | || || | | || |
Sbjct 324176 GATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGGGGAGTAGC 324235
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||||||||| || |||||
Sbjct 324236 GGCATTGAACAGAGTGGG 324253
>seq2
Length=351056
Score = 136 bits (150), Expect = 6e-26
Identities = 180/250 (72%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 120715 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCA 120656
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| ||||||| | ||| || ||||| | ||||| ||||| | ||||
Sbjct 120655 GAGAGATGGACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCCGA 120596
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | ||||||||||| |||||||| ||||||||||||||||| || || |||||
Sbjct 120595 GGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTTCA 120536
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||| | || || ||| || | || | | ||||| | |||||| | |||||||
Sbjct 120535 TGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGGCCT 120476
Query 794131 CGATGATGAT 794140
||| |||||
Sbjct 120475 CGACAATGAT 120466
Score = 87.8 bits (96), Expect = 3e-11
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643
|| ||||||| |||||||||||||| || ||||||||||| ||||||||||| || ||
Sbjct 120097 GGCTCCTTGATATAGGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATC 120038
Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666
||||||||||| || |||||
Sbjct 120037 ATTATCTGGAAGCCGTAGAAGCA 120015
>seq1097
Length=96321
Score = 114 bits (126), Expect = 2e-19
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| ||||||||| | || |||||| ||||||| || | || ||||||||||| || |||
Sbjct 12805 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCTAAC 12864
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757
| |||||||||||||| || ||||| |||||||||||||| |||||| ||
Sbjct 12865 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 12915
>seq1008
Length=106440
Score = 114 bits (126), Expect = 2e-19
Identities = 134/177 (76%), Gaps = 3/177 (2%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||| || |||||||| ||||| |||||||||||| ||||||| || ||| | |
Sbjct 97301 GTACTTGGTCACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGGAG 97242
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||||||||| || | |||||||||||| |||| | ||| || |||||| || ||
Sbjct 97241 GATCAGGCGGACCGAGGTCTGGATCTCCCGGGAGGAGATGGTAGACTTCTTGTT-GTACG 97183
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646
| ||||| | |||||| || ||| || |||| ||||| | ||| |||||||
Sbjct 97182 CAGCCAGCTTGGAGGCCTCCGTAGCGACACGCTCGAAAATGTC-TGGACGAACGAGT 97127
>seq324
Length=24012
Score = 87.8 bits (96), Expect = 3e-11
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|||||||||||| | || |||||| || || || | || |||||||| || ||||||
Sbjct 3039 GCCGCCAACTACTTGGATATCAAGGGACTGCTTGACGTCGGCTGCAAGACAGTTGCCAAC 2980
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757
| |||||||| ||||| | ||||| ||||||| ||| || |||||| ||
Sbjct 2979 ATGATCAAGGGAAAGTCCACAGAGGAGATCCGCAGGACTTTCAACATCCAG 2929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916123962880289
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |