Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 149 9e-30 seq1041 125 1e-22 seq1008 89.7 7e-12 >seq2 Length=351056 Score = 149 bits (164), Expect = 9e-30 Identities = 218/303 (72%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||| ||||| || |||||||| |||||| | || | Sbjct 119801 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCATTCTGGACCGCTGAGGAGATTGATC 119859 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| |||||| ||||| | ||| Sbjct 119860 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 119915 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||||| ||||| || ||| ||| ||| || || || ||||||||| | Sbjct 119916 ATCTCCCACGTCCTGGCCTTCTT-CGCGGCCTCCGACGGTATTGTCAACGAGAACCTCGT 119974 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | ||||||||| | || ||||| |||| || ||||| |||||||| Sbjct 119975 TGAGCGTTTCAGTGCAGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 120034 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || || ||||||||||| || |||||||| || || ||||||||||| ||||||| Sbjct 120035 AATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTATATCAAGGA 120094 Query 1456068 CCC 1456070 || Sbjct 120095 GCC 120097 Score = 129 bits (142), Expect = 8e-24 Identities = 187/259 (72%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| ||||||||||| | |||||| | ||||| | | || | || || || Sbjct 120466 ATCATTGTCGAGGCCGTTGGCATCGAGCAGGAGTTCTTGACTGACGCTCTTCCCTGCGCT 120525 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | ||||||||| ||| ||| ||||||||||||||||| || ||||| ||||||| Sbjct 120526 CTGCTTGGCATGAACTCCAA-GCTGATGTGCCAGTACATTGAGTTC-GTCGCTGACCGCC 120583 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | ||| |||||| | ||||| ||||| | ||||| || ||| | ||| Sbjct 120584 TGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACTCTGCCAATCCCTTCGACTTCATG 120642 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 120643 GAGTCCATCTCTCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 120702 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 120703 AAGGCTGGTGTCATGGCCA 120721 >seq1041 Length=363390 Score = 125 bits (138), Expect = 1e-22 Identities = 289/435 (66%), Gaps = 16/435 (4%) Strand=Plus/Minus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| || |||||||| ||||||||| |||||||||||||| || || | | Sbjct 323987 CAAGCGCCCTGGTGCCTTTGCTATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAATT 323928 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || || || ||||||||||| || ||||| || | || || || || || Sbjct 323927 CCTCGATCTGCGGAAGAACCACGGTAA-GGAGGAGG-----TTCGTGCCCGTGACCTTTT 323874 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| |||||||| |||||| |||||| ||| | | | || | | |||||| | Sbjct 323873 CTACGCTCTGTGGACCCCCGACCTCTTTATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 323814 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||||| ||||| |||||| ||||||||| || ||| |||| || || || || Sbjct 323813 ACTCTTCTGCCCCAACGAGGCTCCCGGCCTGGCTGATGTCTACGGCGAGGAGTTCGATGC 323754 Query 262036 CCTCTATG--AGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGACA 262092 ||| || | | ||| |||| || | || | | Sbjct 323753 CCTTTACGCCAAGTACGAGCAAGAGGGCCGTGGCCGCAAGACCATCAAG---GCTCAGAA 323697 Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152 |||||| |||||| ||| |||||| | |||||| || | |||| |||| ||||||| Sbjct 323696 ACTCTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAACCCCTTCATGCTCTACAA 323637 Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAAC 262210 ||| ||| |||| || || |||||| |||||||||| || | || ||| | ||| Sbjct 323636 GGATGCCTGCAACAGGAAGAGTAACCAGAAGAACCTGGGTACTATTCG-CAG-CTCTAAC 323579 Query 262211 CTGTGCACCGAGATC 262225 |||||||| |||||| Sbjct 323578 CTGTGCACTGAGATC 323564 >seq1008 Length=106440 Score = 89.7 bits (98), Expect = 7e-12 Identities = 118/160 (74%), Gaps = 3/160 (2%) Strand=Plus/Plus Query 724984 ACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGC-GCGC 725042 ||||||| ||| | ||||| |||| || ||| || |||||| ||||| ||| Sbjct 97127 ACTCGTTCGTCCA-GACATTTTCGAGCGTGTCGCTACGGAGGCCTCCAAGCTGGCTGCG- 97184 Query 725043 TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATG 725102 | ||||||| || ||| | | || |||||||||||| | || ||||||||| | Sbjct 97185 TACAACAAGAAGTCTACCATCTCCTCCCGGGAGATCCAGACCTCGGTCCGCCTGATCCTC 97244 Query 725103 CGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| || ||||||| |||||||||||| |||||||||| Sbjct 97245 CCCGGTGAGCTGGCCAAGCACGCCGTCTCTGAGGGCACCA 97284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177700183934462