Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 9e-30
seq1041 125 1e-22
seq1008 89.7 7e-12
>seq2
Length=351056
Score = 149 bits (164), Expect = 9e-30
Identities = 218/303 (72%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||| ||||| || |||||||| |||||| | || |
Sbjct 119801 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCATTCTGGACCGCTGAGGAGATTGATC 119859
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887
|| | || |||| ||||| ||| ||| |||||| ||||| | |||
Sbjct 119860 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 119915
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| |||||||| ||||| || ||| ||| ||| || || || ||||||||| |
Sbjct 119916 ATCTCCCACGTCCTGGCCTTCTT-CGCGGCCTCCGACGGTATTGTCAACGAGAACCTCGT 119974
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
| || || | ||||||||| | || ||||| |||| || ||||| ||||||||
Sbjct 119975 TGAGCGTTTCAGTGCAGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 120034
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || ||||||||||| || |||||||| || || ||||||||||| |||||||
Sbjct 120035 AATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTATATCAAGGA 120094
Query 1456068 CCC 1456070
||
Sbjct 120095 GCC 120097
Score = 129 bits (142), Expect = 8e-24
Identities = 187/259 (72%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
||||| ||||||||||| | |||||| | ||||| | | || | || || ||
Sbjct 120466 ATCATTGTCGAGGCCGTTGGCATCGAGCAGGAGTTCTTGACTGACGCTCTTCCCTGCGCT 120525
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| | ||||||||| ||| ||| ||||||||||||||||| || ||||| |||||||
Sbjct 120526 CTGCTTGGCATGAACTCCAA-GCTGATGTGCCAGTACATTGAGTTC-GTCGCTGACCGCC 120583
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|||| | ||| |||||| | ||||| ||||| | ||||| || ||| | |||
Sbjct 120584 TGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACTCTGCCAATCCCTTCGACTTCATG 120642
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
|||| ||||| || | |||||||||||||| |||||| || || || || |||
Sbjct 120643 GAGTCCATCTCTCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 120702
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
||||| || |||| ||||
Sbjct 120703 AAGGCTGGTGTCATGGCCA 120721
>seq1041
Length=363390
Score = 125 bits (138), Expect = 1e-22
Identities = 289/435 (66%), Gaps = 16/435 (4%)
Strand=Plus/Minus
Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855
||||||| || |||||||| ||||||||| |||||||||||||| || || | |
Sbjct 323987 CAAGCGCCCTGGTGCCTTTGCTATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAATT 323928
Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915
|| || || ||||||||||| || ||||| || | || || || || ||
Sbjct 323927 CCTCGATCTGCGGAAGAACCACGGTAA-GGAGGAGG-----TTCGTGCCCGTGACCTTTT 323874
Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975
|||| |||||||| |||||| |||||| ||| | | | || | | |||||| |
Sbjct 323873 CTACGCTCTGTGGACCCCCGACCTCTTTATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 323814
Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035
||||| ||||| |||||| ||||||||| || ||| |||| || || || ||
Sbjct 323813 ACTCTTCTGCCCCAACGAGGCTCCCGGCCTGGCTGATGTCTACGGCGAGGAGTTCGATGC 323754
Query 262036 CCTCTATG--AGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGACA 262092
||| || | | ||| |||| || | || | |
Sbjct 323753 CCTTTACGCCAAGTACGAGCAAGAGGGCCGTGGCCGCAAGACCATCAAG---GCTCAGAA 323697
Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152
|||||| |||||| ||| |||||| | |||||| || | |||| |||| |||||||
Sbjct 323696 ACTCTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAACCCCTTCATGCTCTACAA 323637
Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAAC 262210
||| ||| |||| || || |||||| |||||||||| || | || ||| | |||
Sbjct 323636 GGATGCCTGCAACAGGAAGAGTAACCAGAAGAACCTGGGTACTATTCG-CAG-CTCTAAC 323579
Query 262211 CTGTGCACCGAGATC 262225
|||||||| ||||||
Sbjct 323578 CTGTGCACTGAGATC 323564
>seq1008
Length=106440
Score = 89.7 bits (98), Expect = 7e-12
Identities = 118/160 (74%), Gaps = 3/160 (2%)
Strand=Plus/Plus
Query 724984 ACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGC-GCGC 725042
||||||| ||| | ||||| |||| || ||| || |||||| ||||| |||
Sbjct 97127 ACTCGTTCGTCCA-GACATTTTCGAGCGTGTCGCTACGGAGGCCTCCAAGCTGGCTGCG- 97184
Query 725043 TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATG 725102
| ||||||| || ||| | | || |||||||||||| | || ||||||||| |
Sbjct 97185 TACAACAAGAAGTCTACCATCTCCTCCCGGGAGATCCAGACCTCGGTCCGCCTGATCCTC 97244
Query 725103 CGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| ||| || ||||||| |||||||||||| ||||||||||
Sbjct 97245 CCCGGTGAGCTGGCCAAGCACGCCGTCTCTGAGGGCACCA 97284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177700183934462
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |