Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1041 250 3e-61 seq182 89.7 6e-13 seq2 89.7 6e-13 >seq1041 Length=363390 Score = 250 bits (276), Expect = 3e-61 Identities = 579/866 (67%), Gaps = 19/866 (2%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||||| || |||| |||||||||||| |||||| | ||||||| | Sbjct 323505 GGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATG 323564 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || || ||| || |||| ||||| |||||||||||| || Sbjct 323565 ATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTG 323624 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| |||||||||||||||||| |||| | || ||||| ||||| | | |||||| Sbjct 323625 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATG 323684 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 111465 || | ||| | || | | || | |||| || |||| || ||||| |||||| Sbjct 323685 GCATACCAGAGTTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCTCTTGCTCGTA 323740 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| | ||| ||||| || |||||||| || | || | || || || |||| || Sbjct 323741 CTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTT 323800 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| || | ||| | ||| ||||||| |||||||| || ||||| || | Sbjct 323801 GGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGT 323860 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 |||||| | | || || || | ||| |||| || | ||| ||||| || | Sbjct 323861 CCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAG 323920 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 111699 || ||||| || | || ||| |||||||| ||||| || |||| || | || Sbjct 323921 ATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGG 323980 Query 111700 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 | ||| | ||| | || | |||||||| || ||| |||||| || || ||||| Sbjct 323981 GCGCTTGTTA---CCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCAT 324037 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 |||| |||||| | || || || || || | ||| ||| | || | | Sbjct 324038 AGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAAT 324097 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 |||| | || || ||||| || || ||| ||||| ||||| | | || Sbjct 324098 GCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAG 324157 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 ||| |||||||||| | ||| ||| | | || | | ||||||||| | | Sbjct 324158 AGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAG 324217 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 111998 ||| ||| || ||| | |||||||| || || || | ||||| |||| ||| | | Sbjct 324218 CTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAA-GTACTTCT 324276 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 |||||||| || ||||||||| | | | |||||||| || ||||||||||||| | Sbjct 324277 GGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAG 324336 Query 112059 CGACCCGCATGAACATGTACTGTGGG 112084 | || ||||| | || || ||| ||| Sbjct 324337 CAACACGCATCAGCAAGTGCTGGGGG 324362 >seq182 Length=78703 Score = 89.7 bits (98), Expect = 6e-13 Identities = 209/311 (67%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 || ||||||||||||||||||| || || || || | ||||| | | |||||| Sbjct 14392 GCGTCAATCTCATCAATGAAGATGATGCAGGGGGTGTTCTTTCGGGCATTGGCGAAGAGA 14333 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-CA 11748 ||||| || | || ||| ||||| |||||||| || || || | | || | || Sbjct 14332 TCGCGGACACGAGAGGGACCGACACCGACAAACATTTCAACGAATTCGGAACCACTGACA 14273 Query 11749 CTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 ||| | ||| || || |||||||| || |||| || || | ||||| || || Sbjct 14272 CTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGCAATGTCTTACCAGT 14214 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATAT 11866 ||| || ||| | ||| | ||| || ||||| ||||| ||||| ||||| | | Sbjct 14213 ACCGGGAGGACCTGAGAGGATGGCACCACGGGGAATCTTTGCACCCAACTTCTCGA--AC 14156 Query 11867 CTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATC 11926 | ||||||||||| ||| || || | || | ||| | |||||| |||| || Sbjct 14155 CGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTGGCCTCGTCCATG 14096 Query 11927 CCCTCAACATC 11937 ||| |||| || Sbjct 14095 CCCGCAACGTC 14085 >seq2 Length=351056 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || || || || || || ||||| ||||| ||||| || || Sbjct 120399 GTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCC 120340 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||| ||| | || | |||||| || ||||||||||||||||| ||| Sbjct 120339 ACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 120280 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || |||| || || ||||||| Sbjct 120279 GGCGAAGGCAACCAGACGCGAAGCGAAGG 120251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628022964189600