Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1108 221 4e-52 seq179 147 7e-30 seq236 118 3e-21 seq597 95.1 4e-14 >seq1108 Length=96137 Score = 221 bits (244), Expect = 4e-52 Identities = 926/1450 (64%), Gaps = 15/1450 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | || || ||| | || || || || || ||||| | ||| | | | || | Sbjct 49705 CCGCCGTCGGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGACGACC 49646 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| || || || |||||| | || || || || | ||| | || | Sbjct 49645 GCATTGAAATCATTGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCA 49586 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || |||| || || || | | Sbjct 49585 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACA 49526 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAAT 349436 | || || || ||||| ||||| || |||||| | ||||| ||| || Sbjct 49525 ACACTGTCTTCGATGCCAAGCGTCTCATTGGTCGCCGTTTTAACGACGCTGAGGTTCAGG 49466 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 | ||| | || || | ||||| | | | || | ||| | | || || | || | Sbjct 49465 CCGATATGAAGCACTGGCCTTTCAA-GATCATCGAGAAGGC--TACCAAGCCCGTCATCG 49409 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 ||||||| | || ||||| || || || || || || || || | ||| | Sbjct 49408 AGGTTGAGTTCAAGGGTGAGGCCAAGCAGTTCACCCCTGAGGAGATCTCTGCTATGATCC 49349 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || ||| || | ||||| || || | |||| || || | ||||||| | Sbjct 49348 TCGTCAAGATGCGTGAGACCGCTGAGGCTTACCTCGGTGGCACCGTCAACAATGCTGTCA 49289 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 ||||||| || ||||| || || || | |||||| || || || || || || || Sbjct 49288 TTACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCCGGTCTCA 49229 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || | || || || | || ||||| || ||||| || || || |||||||| | Sbjct 49228 TTGCCGGTCTCAACGTCCTCCGTATCATTAACGAGCCCACCGCCGCTGCCATTGCATACG 49169 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | ||||| || | | || || || |||| || || ||| | |||||||||| Sbjct 49168 GTCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTTCTGATCTTCGATCTCGGTGGTGGTA 49109 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 |||| ||||| || || || || | || ||||| || || || ||||| || ||||||| Sbjct 49108 CTTTCGATGTTTCTCTTCTGACCATCGAGGAGGGTATCTTCGAGGTTAAGGCCACTGCTG 49049 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| || || || || || ||||| || || || || || | Sbjct 49048 GTGACACCCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTCAACG 48989 Query 349917 AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 | || ||||| ||||| || | ||| | || | | || | ||||| || Sbjct 48988 AGTTCAAGCG-CAAGCACAAGAAGGATCTGACCACCAACGCCCGTGCTCTCCGTCGTCTC 48930 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | || || || || ||||| ||||| || | || || || |||| |||||||| || Sbjct 48929 CGCACCGCTTGCGAGCGTGCCAAGCGCACCCTCTCTTCCGCTGCCCAGACCTCTATCGAG 48870 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || ||||| || || || |||| | || || || ||||| || || ||| Sbjct 48869 ATCGACTCTCTCTTCGAGGGTGTTGACTTCTACACCTCCATCACCCGTGCCCGTTTCGAA 48810 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 || | || |||||| || | | || ||||| || || || || | || Sbjct 48809 GAGCTCTGCCAGGATCTCTTCCGCGGCACCATGGAGCCCGTTGAGCGTGTCCTCCGTGAC 48750 Query 350156 G-CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214 | ||| | || | | || | | | || | || | || |||||||| || ||||| Sbjct 48749 GCCAAGATTGACAAGTCCTCCG-TCCACGAGATCGTCCTTGTCGGTGGTTCCACCCGTAT 48691 Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA-ACCTTCTAGATCAA 350273 || || | || || | | || || || || || ||| || || | || || | Sbjct 48690 CCCCAAGATCCAGAAGCTCGTCTCCGACTTCTTCAA---CAAGGACGCCAACAAG-TCCA 48635 Query 350274 TTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAA 350333 | || || ||||| || ||||| || ||||| || || ||||| |||| | || || Sbjct 48634 TCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCCGCTATCCTGTCCGGTG 48575 Query 350334 ATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTG 350390 | || ||| || | | || | | || || ||||| |||| ||||| || | Sbjct 48574 ACCAGTCTTCCAAGTCCACCAACGAGATCCTGCTTCTCGATGTCGCTCCTCTTTCCCTCG 48515 Query 350391 GATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTA 350450 | | || || |||||| || |||||| | | ||| | || | ||| | || | Sbjct 48514 GTATTGAGACCGCTGGTGGTGTCATGACTCCTTTGATTAAGCGCAACACCACTATCCCCA 48455 Query 350451 CAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAG 350510 | || |||||| | || || || || | | || || ||||| | || || || | Sbjct 48454 CCAAGAAGTCCGAGACCTTCTCCACCTACTCCGACAACCAGCCCGGTGTCCTGATCCAGG 48395 Query 350511 TATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAA 350570 | || || ||||| ||||||||||| || || || || || ||| | || || | Sbjct 48394 TCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTCCTCGGAAAGTTCGAGCTTA 48335 Query 350571 GTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATT 350630 || ||||| || || | || ||||| ||| |||| ||| | || ||| ||||| Sbjct 48334 CTGGCATTCCCCCCGCTCCCCGTGGTGTTCCCCAGGTTGAGGTCACCTTTGATGTTGATG 48275 Query 350631 CAAATGGTAT 350640 | || ||||| Sbjct 48274 CCAACGGTAT 48265 >seq179 Length=79788 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || || || || || || || || || || || Sbjct 52172 CATACCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 52113 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||| || ||||||||||| || || || || ||||| ||||| || ||||| || Sbjct 52112 GGAGAGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGG 52053 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || ||||| || || || | || |||||||| || | || |||| || Sbjct 52052 AGGAATGCCCTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTC 51993 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || |||||||||| || || || || || || || || ||||||||||| Sbjct 51992 GACCTCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 51942 Score = 116 bits (128), Expect = 1e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||||| | ||||| | || ||||| |||||||| || || || || || Sbjct 51944 CATACCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTC 51885 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || | || || || || || || ||||| ||||| || || Sbjct 51884 GGACAGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGG 51825 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || | || || || || || | ||||||| || Sbjct 51824 GGGAATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTC 51765 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| || || || | ||||||||||| || || || || Sbjct 51764 AACCTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGAC 51726 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || || || || || || || | || || || || || || || || ||||| || Sbjct 52361 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAA 52302 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTA-CAT 140664 ||| ||||| ||||| ||||| ||||| || || || ||||| || || ||| ||| | | Sbjct 52301 GATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTAACGT 52243 Query 140665 TATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTA 140724 | || || | || || || || || || || | ||||||||||| || || || | Sbjct 52242 TGTCGATAGTGTCTGAGCTCTCGACCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGA 52183 Query 140725 CAAAAATCTGCAT 140737 |||| |||||||| Sbjct 52182 CAAAGATCTGCAT 52170 Score = 84.2 bits (92), Expect = 7e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | ||||| | || ||||||||||| || || || || || || Sbjct 51661 CATGCCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 51602 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || ||||| | ||| || || ||||| Sbjct 51601 GGACAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGG 51542 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||| || || || || ||||| || || | || || || || || | ||| | ||| | Sbjct 51541 AGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATC-GCTGGACT 51483 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 |||| ||||| || | ||||| || || Sbjct 51482 CAACCTCAAGGGTGATGGTCTTGCCAGT 51455 >seq236 Length=49381 Score = 118 bits (130), Expect = 3e-21 Identities = 104/129 (81%), Gaps = 3/129 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 |||||||||||| | || || ||| || || | |||||||||||||||||||| || Sbjct 9115 CGTGGCACACCAAGCGTGACGTTC---TTGGACGACACACCAGCAAAGTGGAAAGTGTTC 9059 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | |||||| | |||||||||||| ||||| || |||| |||||| |||||||| Sbjct 9058 AGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGGGCCGCAAGAACGCCGACCATTTCA 8999 Query 377578 CCAGGATTG 377586 ||||| ||| Sbjct 8998 CCAGGGTTG 8990 Score = 100 bits (110), Expect = 9e-16 Identities = 170/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || |||||||||| ||| || || ||||||||||| | ||| |||||||| |||| Sbjct 8326 ATGTAACCAGTTTCGGCAGTCTTGACAGCAGTATCAATCAGACCCTCACGACCAGCCATG 8267 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 || |||||||| || ||||||||||| | |||| || |||| |||||| ||||| Sbjct 8266 GCGTGGAAGAAGAACTCAGTAGGAGTCAAGCCACGAAGGTATGAGTTCTCAACGAATCCA 8207 Query 378352 CTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCA 378411 | | | || || | ||| | || || | ||||| | ||||||| || || || Sbjct 8206 CGGGACTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGAAGGGTACGATACTTGAAGCCG 8147 Query 378412 TATGGAATTCGTTTTCCATCAACATTCTGTTGAC---CAAGTGCAGAAACCATTTGAGCA 378468 | ||||| || || || || || |||||| | |||| |||| ||| || | | Sbjct 8146 AACGGAATACGCTTGCCTTCCACGGACTGTTGTCCCACAAGCGCAG---TCATCTGCGAA 8090 Query 378469 ATATT 378473 ||||| Sbjct 8089 ATATT 8085 >seq597 Length=435025 Score = 95.1 bits (104), Expect = 4e-14 Identities = 237/357 (66%), Gaps = 5/357 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGA-AGCATATTT 349590 ||||| || |||| | ||| | | | ||| |||||||| ||||| || ||| || | Sbjct 24582 CCCGAGGAGGTTTCCGCCATGATCCTGGGTAAGATGAAGGATATTGCCGAGAGC-TACCT 24524 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | || || || | || ||| |||| || || ||||| || | || |||||||| Sbjct 24523 GGGCAAGACTGTCACCCACGCCGTTGTTACCGTTCCCGCCTACTTCAGCGACGCCCAGCG 24464 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | || || || ||||| || | ||| || || | || || || | | | || || Sbjct 24463 TCAGGCTACCAAGGATGCCGGTACCATCGCCGGTCTCAACGTCCTCCGTGTTGTCAACGA 24404 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770 ||||| || || || || || || || ||||| || | ||||| || | | Sbjct 24403 GCCCACCGCCGCCGCTATCGCCTACGGTCTTGACAAGACCGGTGAC---GAGCGCCAGGT 24347 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 || ||| ||| | ||||||||||| || ||||| || || || | |||| | || Sbjct 24346 CATTGTTTACGATCTCGGTGGTGGTACCTTCGATGTGTCTCTTCTGTCTATTGACAACGG 24287 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 | || || ||| || || |||||||| || || |||||||| || ||||| || Sbjct 24286 TGTCTTCGAGGTTCTGGCTACCGCTGGTGACACCCACCTTGGTGGTGAGGATTTCGA 24230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515232054259253