Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1041 241 1e-58 seq242 161 1e-34 >seq1041 Length=363390 Score = 241 bits (266), Expect = 1e-58 Identities = 477/700 (68%), Gaps = 6/700 (1%) Strand=Plus/Minus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||| ||| |||| ||| ||| |||||||| || ||||| | || || |||||||| Sbjct 324299 TGAGACATACCACTTGATGTCCCAGAAGTACTTCACCCACGCTTCCCCCACTCTGTTCAA 324240 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 || | ||| || || ||| | | ||||||||||| | |||| | |||| Sbjct 324239 TGCCGCTACTCCCCAACCCCAGCTTGCATCTTGCTTCCTGGTTGACATGAGCGCTGACAG 324180 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 ||||| || ||||| || || |||||| |||||| ||||||||| | ||||| Sbjct 324179 CATCGAGGGTATCTATGATACTCTCAAGACTTGTGCCATGATCTCCAAGACCGCCGGTGG 324120 Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 ||||||| | | || || | || | || || | ||| | || || || ||| Sbjct 324119 TATCGGTCTGAA-TG-TCCACCGCATTCGCGCTACCGGTTCTTACATTGGTGGAACCAAC 324062 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 ||| | || | || || || |||||||| || || || |||||||| || || || ||| Sbjct 324061 GGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGCTATGTC 324002 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 ||||||||||| |||||| || | || || |||||||| ||||||||||||||| Sbjct 324001 GACCAGGGTGGTAACAAGCGCCCTGGTGCCTTTGCTATCTACCTGGAGCCGTGGCACGCC 323942 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659 || | | || || ||||| ||||| ||| || ||| | || ||| | || |||| Sbjct 323941 GATGTCTTCGAATTCCTCGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGTGCCCGT 323882 Query 53660 GACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGA 53718 ||||| || ||| |||||||||| || |||||||| ||| | || ||| ||| Sbjct 323881 GACCTTTTCTAC-GCTCTGTGGACCCCCGACCTCTTTATGAAGCGCGTTGAGGCCAACGG 323823 Query 53719 GGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGA 53778 || ||| || | ||||| |||||| |||||||| | ||||||||| ||||| Sbjct 323822 TGACTGGACACTCTTCTGCCCCAACGAGGCTCCCGGCCTGGCTGATGTCTACGGCGAGGA 323763 Query 53779 GTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGC 53838 ||| | | | || | ||||| ||||||| | |||| ||||||| Sbjct 323762 GTTCGATGCCCTTTACGCCAAGTACGAGCAAGAGGGCCGTGGCCGCAAGACCATCAAGGC 323703 Query 53839 GCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTG 53898 | | | ||| |||| || ||| || |||| ||||| || | || | |||| Sbjct 323702 TCAGAAACTCTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAACCCCTTCATGCT 323643 Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||||||||| | |||| |||||| |||||||||||| Sbjct 323642 CTACAAGGATGCCTGCAACAGGAAGAGTAACCAGAAGAAC 323603 Score = 84.2 bits (92), Expect = 2e-11 Identities = 166/242 (69%), Gaps = 9/242 (4%) Strand=Plus/Minus Query 55689 ACGGGGGGTCCGTCCAGA--ATCTGGAGATTCCTCTGCG-TCTCAAGGAGATTTACCGGA 55745 |||| || |||||||||| ||| | ||| | || | |||||| | ||| || Sbjct 322872 ACGGTGGTTCCGTCCAGAACATCCCTAACATCCCCGCCGATATCAAGGCCCTGTACAAGA 322813 Query 55746 CGGTGTGGGAGATTCCACAG---AAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGT 55802 | || |||||||| | ||| || | |||| | ||| || || || ||||| | Sbjct 322812 CCGTCTGGGAGATCTCCCAGCGCAACATTCTG---CAGATGGCCGCCGACCGCGGTGCCT 322756 Query 55803 ACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGA 55862 ||||||| ||||| ||||| || |||||| | | || | ||| | ||| |||| | | Sbjct 322755 ACATCGATCAGTCGCAGTCCCTTAACATCCACCTTAAGGAGCCTACTATGGGCAAGCTCA 322696 Query 55863 GCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGA 55922 | |||||||| || ||||||| ||| || ||||| || |||||||| ||||| | Sbjct 322695 CCAGCATGCACTTCGCTGGCTGGAAGATGGGTCTGAAGACCGGCATGTACTACCTGCGTA 322636 Query 55923 CC 55924 || Sbjct 322635 CC 322634 >seq242 Length=295557 Score = 161 bits (178), Expect = 1e-34 Identities = 312/456 (68%), Gaps = 12/456 (3%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||||||||| || ||||| || |||| ||||||||| |||||||| | ||| | Sbjct 158355 CCAGTTCCGATACCATCCGCACCGTTGATCAAAATCATCGGGACGACAGGCATAAAGACC 158414 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | || | || ||||| | |||| | || | | | || || Sbjct 158415 TCGGGCTCAATCTTCTTGCCATCGTCTTCGTTGTACGTCAGTAGGGGTTCATCGGCCGAG 158474 Query 117272 TCGAATATGTTCTTG-GTCCAC--GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 | ||| | |||| || || || | ||||||||| |||||||||||| || ||| Sbjct 158475 TGGAAAAC---CTTGCGTGCAAAGGGAGACAGGCGAGTGTAAATGTAACGAGCACTGGCA 158531 Query 117329 GCATCCTTGCCACCAGCA---AGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTC 117385 ||| ||||||| | || || ||||||| | |||||| ||||||| | ||| Sbjct 158532 CAATC---GCCACCACCTTGGAGTCGACTACCGAAATTTCCACTGGGCTCCAGGCAGTTG 158588 Query 117386 AGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCC 117445 | |||||||| ||| |||||| | ||||| | || || || || ||| | Sbjct 158589 ATGTTGTTGGAGCCAACAAAGGTCTGAGCAAGACCAACGATAGTCTGCTGCAGGGAGACA 158648 Query 117446 TCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATG 117505 ||||| || || || || ||| | | || | || ||||||| | ||||||||||| Sbjct 158649 TCACCGTGATGGTAGGCTGTCATTCCGGATACATGACCTGCCAGCTCAACCACCTTCATG 158708 Query 117506 TCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGA 117565 || | | ||||| || |||| | || |||||||||||| | |||||||| | Sbjct 158709 TCCTTCTTTAGGTTGCGGCGGAAACAGGTGTGAAGCACCTTGCGCTGTCCTGGCTTCAAA 158768 Query 117566 CCATCCGCCACGTGAGGGATCGAACGCTTGATGTCC 117601 |||||| | ||| |||||||||||||| | | ||| Sbjct 158769 CCATCCACAACGGAAGGGATCGAACGCTGGTTATCC 158804 Score = 125 bits (138), Expect = 8e-24 Identities = 307/457 (67%), Gaps = 14/457 (3%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAA- 151934 || || ||||| || || |||||||||| || ||||||||| || | ||| | |||| Sbjct 158355 CCAGTTCCGATACCATCCGCACCGTTGATCAAAATCATCGGGACGACAGG--CATAAAGA 158412 Query 151935 -CTCCGGCTCCACCTG-TTGAC--CGTCATCCATCACGTATTTCAAAACGGAATTGTCAG 151990 ||| ||||| | || ||| | |||| || | ||| ||| | || | || | Sbjct 158413 CCTCGGGCTCAATCTTCTTGCCATCGTCTTCGTT---GTACGTCAGTAGGGGTTCATCGG 158469 Query 151991 CCGGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050 ||| | ||| | | || | | ||| || || ||| | ||||| || | |||| Sbjct 158470 CCGAGTGGAAAACCTTGCGTGCAAAGGGAGACAGGCGAGTGTAAATGTAACGAGCACTGG 158529 Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110 | ||| |||||| || || | || || | |||| |||||| ||| ||||| Sbjct 158530 CACAATCGCCACCACCTTGGAGTCGACTACCGAAATTTCCACTGGGCTCCAGGCAGTTGA 158589 Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170 |||||||| ||| || || ||||||| | | || || || |||||| | | Sbjct 158590 TGTTGTTGGAGCCAACAAAGGTCTGAGCAAGACCAACGATAGTCTGCTGCAGGGAGACAT 158649 Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT--CCCGCCAACTGCGCCACCTTCAT 152228 ||||||| || || || ||| |||| ||| || || |||| || |||||||||| Sbjct 158650 CACCGTGATGGTAGGCTGTCAT-TCCG-GATACATGACCTGCCAGCTCAACCACCTTCAT 158707 Query 152229 GTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAA 152288 |||| || | ||||| || ||||| || || |||||||||||| ||| ||||| Sbjct 158708 GTCCTTCTTTAGGTTGCGGCGGAAACAGGTGTGAAGCACCTTGCGCTGTCCTGGCTTCAA 158767 Query 152289 ACCGTCCACCACGTGAGGAATCGAACGCTTGATGTCC 152325 ||| ||||| ||| ||| |||||||||| | | ||| Sbjct 158768 ACCATCCACAACGGAAGGGATCGAACGCTGGTTATCC 158804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547208126929800