Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq179 131 1e-25
>seq179
Length=79788
Score = 131 bits (144), Expect = 1e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | ||||||||||||| || || ||||||||||| || ||||| || || ||
Sbjct 52397 GCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 52338
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| || || || ||||| || || || | |||||| ||||| || ||
Sbjct 52337 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGG 52278
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | |||||| | || |||||| |||||| |
Sbjct 52277 AATACCCTCCTTGTCCTGGATC-TTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGA 52219
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || || || ||||| | || || ||||| ||||||||
Sbjct 52218 CCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 52170
Score = 93.3 bits (102), Expect = 3e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | || || | ||||| |||||||| |||||| || ||||| || || ||
Sbjct 51658 GCCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 51599
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || |||| || || || || ||||| || || |||||||||||||| || ||
Sbjct 51598 CAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGG 51539
Query 34599 CACTCCCTCCTTGTCTGTGATCTT 34622
| ||||||||||| ||||||
Sbjct 51538 GATACCCTCCTTGTCCTGGATCTT 51515
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || | ||||| ||| ||||| || ||||| || || ||
Sbjct 52168 CCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 52109
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| || | |||||||| || || || || || || | ||||||||| || || ||
Sbjct 52108 AGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGA 52049
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| |||||||| ||| |||||| | || || || || ||||| ||| ||
Sbjct 52048 ATGCCCTCCTTATCTTGGATCTTG-GACTTCACATTATCGATAGTGTCGGATGACTCGAC 51990
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || ||||| || || | ||| || || |||||||||||
Sbjct 51989 CTCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 51942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314725185032183
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |