Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq179 188 2e-42 seq1041 131 4e-25 seq975 131 4e-25 >seq179 Length=79788 Score = 188 bits (208), Expect = 2e-42 Identities = 167/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| || ||| ||| || |||||||| || |||| ||| || | ||| || ||| Sbjct 52378 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCC 52319 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || ||||||||||| || || |||||||| |||| || |||||||||||| Sbjct 52318 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGG 52259 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || ||||| ||||| ||||| ||||| || ||||| || ||||| |||||| Sbjct 52258 ATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACCTCTAGCGTGATAGTCTTT 52199 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| ||||| | |||||| Sbjct 52198 CCGGTCAGAGTCTTGACAAAGATCTGCAT 52170 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| |||||||||||||| |||||||| || || | || || | || || Sbjct 51925 AGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCC 51866 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| ||||| ||||| || || ||||| || |||| || ||||||||| Sbjct 51865 TCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 51806 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct 51805 TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTC 51746 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 ||||| || || ||||| || Sbjct 51745 TTTCCGGTCAGGGTCTTGAC 51726 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||||||||| || ||||| || || |||||||| || || | || || Sbjct 52163 ACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGT 52104 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| |||||||||||||||||||| || || ||||| || ||||||| || Sbjct 52103 ACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCC 52044 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| || |||||||| ||||| || ||||| ||||| || || ||||| || Sbjct 52043 CTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACCTCAAG 51984 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || ||||| ||||| || || | |||||| Sbjct 51983 TGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 51942 Score = 140 bits (154), Expect = 8e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||| ||||| || |||||||| || || | || || | || || Sbjct 51642 AGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCC 51583 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| | || |||||||||||||| | || ||||||||| Sbjct 51582 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCC 51523 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||| || | |||||||| || ||||| ||| Sbjct 51522 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 51463 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 51462 TTGCCAGTGA 51453 >seq1041 Length=363390 Score = 131 bits (144), Expect = 4e-25 Identities = 194/275 (71%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 |||||| ||||| ||||| ||| |||||| ||||| |||||||| | || Sbjct 323603 GTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGT 323662 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| | || ||| |||||||| || ||| || | ||| || || ||||| | | Sbjct 323663 CTCGGTCTGGGCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGATGGTCTTGCGGCC 323722 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 || || | ||||||||| ||| || | ||||| ||| || ||||||||| | Sbjct 323723 ACGGCCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGC 323782 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332 || ||||||||||| |||||||||||||| |||| | ||||| ||| || || || Sbjct 323783 CAGGCCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTT 323842 Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367 ||| |||||||| | |||||| | || ||||||| Sbjct 323843 CATAAAGAGGTCGGGGGTCCACAGAGCGTAGAAAA 323877 >seq975 Length=109893 Score = 131 bits (144), Expect = 4e-25 Identities = 139/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || ||||||||||| |||||||| Sbjct 47145 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 47204 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| ||||||||||| || | || ||||||||||||||||| || ||||| ||| Sbjct 47205 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 47264 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 47265 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 47321 Query 211104 AA 211105 || Sbjct 47322 AA 47323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159134905768115